Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M13
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical
           protein F33D4.5 protein.
          Length = 377

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/69 (28%), Positives = 37/69 (53%)
 Frame = +3

Query: 393 PIDXVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 572
           P   V+   ++K   YT  +A+  H+E   P+++N P+A I  ++E NMT  +QT+ +  
Sbjct: 97  PTLDVFIKSHFKTQYYTVSEALDMHRELQSPSIYNNPNAPIRLRLELNMTTERQTKMVTG 156

Query: 573 FTRLSLLXH 599
              +  + H
Sbjct: 157 SDEIVPVPH 165


>Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical
           protein F35H8.3 protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 438 YTAEDAVKAHQETHHPTMFNA 500
           +T EDA++ HQ T HP  F++
Sbjct: 264 FTTEDALRHHQSTAHPATFDS 284


>Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical
           protein C37E2.2a protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 150 QPWLSR-FYLYDFRFIYSFNFVLCIFY 73
           QP L   +Y+Y    + + NFVLC+FY
Sbjct: 27  QPRLGHHWYVYKLVMLTNLNFVLCVFY 53


>Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical
           protein F31F6.5 protein.
          Length = 913

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -1

Query: 449 LSRVDHPFVILHRIHXVDGYRFVLITEMLVHHCFNY---LSPSLIVRNE 312
           + ++  PF++ + +    G  FV+   + ++ C+N+   L+P  +V N+
Sbjct: 533 IGKIYGPFILSNSVRIFSGLIFVVYLAIAMYGCYNFREGLNPGNLVTND 581


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,084,093
Number of Sequences: 27780
Number of extensions: 281882
Number of successful extensions: 758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)