Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M11
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0927 + 33082645-33083286                                         91   9e-19
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    32   0.46 
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552...    27   9.9  
01_05_0227 - 19512866-19514983                                         27   9.9  

>01_06_0927 + 33082645-33083286
          Length = 213

 Score = 90.6 bits (215), Expect = 9e-19
 Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
 Frame = +3

Query: 195 EIKLYKNARERXKHDNMAELYAVVCTLQHLXKAYMRDCVRAQEYTAACSRLLVQYKVAFK 374
           E+KL+ + RER   +++A+LYA++   + L +AY+RD V A +Y A C +L+ Q+     
Sbjct: 2   EVKLWNDKRERELLESLADLYAIIKATEKLERAYVRDLVSAADYEAECLKLISQFNSLSS 61

Query: 375 QVQADEFPNIEAFVAKYRLXCPAALERIXENKPNLIXDDKGNTNK-----------YIAE 521
            +       I  FV  YRL CPAAL R+ ++      + +   +             IA+
Sbjct: 62  SLAG--VVTIPRFVEAYRLDCPAALNRLVQSGVPATVELRAAASSSAPASSAASAAAIAQ 119

Query: 522 IVSLFITLMDKLRLXFRAMDMIQPELRDLRDTMDRLS-MLPDDFE 653
            V  FIT MD ++L   A D ++P L DL  +M +L  +LP DFE
Sbjct: 120 CVQSFITAMDAVKLNMLANDQVRPLLHDLSTSMGKLGPVLPPDFE 164


>02_01_0369 +
           2649178-2655291,2655773-2656601,2656737-2657425,
           2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 KHDNMAEL-YAVVCTLQHLXKAYMRDCVRAQEYTA-ACSRLLVQYKVAFKQVQADEFPNI 404
           +HDN+ +L   ++C L    KA   D  + +EY A  C+R  ++  V F      E  + 
Sbjct: 802 EHDNLRKLTQEMICRLVEKLKAMTSDIAKTEEYVAELCNR--IELSVKFMSQHEAEIEHT 859

Query: 405 EAFVAK 422
              VAK
Sbjct: 860 AVLVAK 865


>07_03_0696 -
           20754773-20754821,20754930-20755028,20755107-20755226,
           20755317-20755402,20756013-20756109,20756181-20756268,
           20756358-20756454,20756797-20756892,20757029-20757125,
           20757571-20757689,20758559-20758616,20758751-20758857
          Length = 370

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
 Frame = +3

Query: 255 YAVVCTLQHLXKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEF-----PNIEAFVA 419
           +AVVC + +L   Y+RD   A E+ A   R ++  +   K+V  D +     P+ +    
Sbjct: 296 WAVVCDVWYLEPQYLRDGETAIEF-AERVRDMIAARAGLKKVPWDGYLKHNRPSPKHTEE 354

Query: 420 KYRLXCPAALERIXEN 467
           K R+   + L R+ E+
Sbjct: 355 KQRIFADSVLRRLEES 370


>01_05_0227 - 19512866-19514983
          Length = 705

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 51  KLFVCLLILFYYL*NEVSRCLFH 119
           K+F CLL+ + +L + + RC  H
Sbjct: 241 KIFACLLLSYIHLPHHLKRCFLH 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,742,843
Number of Sequences: 37544
Number of extensions: 278374
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)