Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M11
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p pro...   246   2e-65
AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA...   246   2e-65
AE013599-3289|AAS64755.1|  352|Drosophila melanogaster CG9294-PB...    33   0.26 

>AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p
           protein.
          Length = 210

 Score =  246 bits (602), Expect = 2e-65
 Identities = 110/163 (67%), Positives = 138/163 (84%)
 Frame = +3

Query: 165 MQDTRPELYEEIKLYKNARERXKHDNMAELYAVVCTLQHLXKAYMRDCVRAQEYTAACSR 344
           MQ+  PELYEE+KL++NARER K+DNMA+LYA++ T+Q L KAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 345 LLVQYKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNLIXDDKGNTNKYIAEI 524
            LVQYKVAFKQVQ DEFP++E FV K+RL CPAALERI E++P  I DDKGNT+K IAEI
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEI 120

Query: 525 VSLFITLMDKLRLXFRAMDMIQPELRDLRDTMDRLSMLPDDFE 653
           VSLFIT+MDKLRL    MD +QP+++DL D M+RLS++P+DF+
Sbjct: 121 VSLFITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFD 163


>AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA
           protein.
          Length = 210

 Score =  246 bits (602), Expect = 2e-65
 Identities = 110/163 (67%), Positives = 138/163 (84%)
 Frame = +3

Query: 165 MQDTRPELYEEIKLYKNARERXKHDNMAELYAVVCTLQHLXKAYMRDCVRAQEYTAACSR 344
           MQ+  PELYEE+KL++NARER K+DNMA+LYA++ T+Q L KAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 345 LLVQYKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNLIXDDKGNTNKYIAEI 524
            LVQYKVAFKQVQ DEFP++E FV K+RL CPAALERI E++P  I DDKGNT+K IAEI
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEI 120

Query: 525 VSLFITLMDKLRLXFRAMDMIQPELRDLRDTMDRLSMLPDDFE 653
           VSLFIT+MDKLRL    MD +QP+++DL D M+RLS++P+DF+
Sbjct: 121 VSLFITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFD 163


>AE013599-3289|AAS64755.1|  352|Drosophila melanogaster CG9294-PB,
           isoform B protein.
          Length = 352

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 211 KMRVNXKSMITWLSSMLSSVPFSTXRRHTCVIVCEHRNTRRHAVVSSCSTKWLSNKYRLM 390
           ++R N   +  WL S+L  +P +T    T V+      TRR    SS +++  +++  + 
Sbjct: 22  RIRPNEGKIFEWLGSIL--LPSTTTTTSTPVVATTSTTTRRTTTTSSTTSRTTTSRTTVA 79

Query: 391 SFPI 402
           +FPI
Sbjct: 80  NFPI 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,496,197
Number of Sequences: 53049
Number of extensions: 509042
Number of successful extensions: 1287
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)