Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M11
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-11|CAB54493.1| 210|Caenorhabditis elegans Hypothetical... 139 1e-33
AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical... 33 0.23
AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical ... 30 1.6
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 29 2.9
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 6.7
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 6.7
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 6.7
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 6.7
AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical ... 28 6.7
U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead trans... 27 8.8
>AL110500-11|CAB54493.1| 210|Caenorhabditis elegans Hypothetical
protein Y87G2A.10 protein.
Length = 210
Score = 139 bits (337), Expect = 1e-33
Identities = 71/161 (44%), Positives = 100/161 (62%)
Frame = +3
Query: 165 MQDTRPELYEEIKLYKNARERXKHDNMAELYAVVCTLQHLXKAYMRDCVRAQEYTAACSR 344
M L E++L++N ER + +N++EL+AV+ L+HL K + RD V A EY + C +
Sbjct: 1 MSSQNANLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFK 60
Query: 345 LLVQYKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNLIXDDKGNTNKYIAEI 524
L+ QYKV + V +IE F KYRL CPAA+ERI E +P + DD+GN K+IA I
Sbjct: 61 LIDQYKVTMRLVHGAT--SIEDFAKKYRLHCPAAIERIREGRPITVKDDQGNVLKHIASI 118
Query: 525 VSLFITLMDKLRLXFRAMDMIQPELRDLRDTMDRLSMLPDD 647
V FIT +D LRL RA+D + P L DL + ++ S +P D
Sbjct: 119 VEQFITFLDALRLNTRAVDDLYPGLDDLYNAINTTSRVPID 159
>AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical
protein F45C12.16 protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 216 HFCTI*SLHTIPDVYLASLLFLHRFITITISNNETNSEKP-RFINNKIISINTQIILIFI 40
H+C + + + L + F FI T +ET E P R NNK++ I QI +
Sbjct: 112 HYCKAYGVSIVNNSQLTDVTFYEMFILYT---DETTKECPYRIENNKLLDIYDQICTYYF 168
Query: 39 PTKFY 25
++FY
Sbjct: 169 FSEFY 173
>AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical
protein Y20C6A.2 protein.
Length = 570
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 273 LQHLXKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLXC 437
L+ K +++ + Y + + L + FK + +E PN + F KYRL C
Sbjct: 212 LKFWIKGFIQHLKCVELYVESDTSDLQNIAILFKNISYEEAPNDKVFEYKYRLVC 266
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 174 YLASLLFLHRFITITISNNETNSEKPRFINNKIISINTQIILIFIPTKFYPI 19
+ +L FL F T TIS T +K FI N I I ++++F+P + I
Sbjct: 215 FYKTLTFL--FKTRTISQKTTEMQKKLFI-NLCIQITVPLVVVFVPCVYLNI 263
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 410 SFNIGKLISLYLFESHFV-LHEETTACRRVFLCSHTITHVCLLQ 282
+F IGK I+ H V LHEE C R+ L I+ + + Q
Sbjct: 38 AFPIGKFIATCFLSFHEVKLHEELDKCARLLLLGAIISAIPIFQ 81
>Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical
protein F40G12.10 protein.
Length = 438
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 306 CVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXE 464
C Y A + +A +++QA E PNI+ R PAA+E + +
Sbjct: 336 CAIVSNYGAGRAGSFFVAVLAIEKLQAGEAPNIKEIALSVRSQRPAAIETLSQ 388
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 357 YKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNL 479
YK+ ++Q+ +D++ +E + L CP R N L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 357 YKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNL 479
YK+ ++Q+ +D++ +E + L CP R N L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 357 YKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNL 479
YK+ ++Q+ +D++ +E + L CP R N L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 357 YKVAFKQVQADEFPNIEAFVAKYRLXCPAALERIXENKPNL 479
YK+ ++Q+ +D++ +E + L CP R N L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189
>AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical
protein B0041.3 protein.
Length = 158
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 216 HFCTI*SLHTIPDVYLASLLFLHRFITITISNNETNSEKP 97
H C++ SL ++ S LF+ +FI I I N++ + KP
Sbjct: 65 HNCSVSSLVRANKLWSPSALFMKQFIRIPIFNSQQPNLKP 104
>U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead
transcription factor familyprotein 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.8
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = -1
Query: 530 RYNFCNVFISVPFVIXD--EIRFVLXYSFQSSRTV*---PVFSNKSFNIGKLISLYLFES 366
+Y +F S+ FV E FV+ + S+++ +F + + I K S YL+ +
Sbjct: 2 QYALTVIFQSILFVQCQVGEAAFVISQEHEVSKSISINMTLFPSIKWIIHK--SFYLYLT 59
Query: 365 HFVLHEETTACRRV---FLCSHTITHVCLLQVLKGTDDSIELSHVIM 234
+FV+ ++T C + + SH++ V + K T SI S M
Sbjct: 60 YFVMSQQTLPCFQAADSYNYSHSLPKVQFARFSKYTPQSISYSSTQM 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,349,621
Number of Sequences: 27780
Number of extensions: 267760
Number of successful extensions: 715
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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