Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M09
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0187 - 18878500-18879224,18879971-18880043 33 0.15
01_01_0097 - 741881-742977,743100-743320,743438-744156 31 0.59
10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753... 29 2.4
03_02_0334 + 7570568-7570709,7571622-7571844,7572178-7572257,757... 29 3.1
12_02_0453 + 19192060-19192301,19192477-19192559,19193246-191933... 29 4.1
08_01_1048 + 10624027-10624575,10625332-10625522,10626044-106265... 29 4.1
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 29 4.1
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 29 4.1
02_05_1291 - 35516715-35517251,35517339-35518185,35518480-355190... 28 5.5
12_02_0469 - 19424703-19424906,19425073-19425142,19425409-194263... 28 7.2
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 28 7.2
05_01_0217 + 1630083-1630205,1630467-1630710,1631695-1632508,163... 28 7.2
11_04_0215 + 14944039-14944227,14944444-14944905,14945513-14945713 27 9.6
11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,458... 27 9.6
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 27 9.6
>05_04_0187 - 18878500-18879224,18879971-18880043
Length = 265
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 KQNADIIVFPELTLTNRSTSFVAPLHGILKQYPIPALHPNLYD-NIMVSISAAARTNQIY 420
KQN ++ P + R F + + +Q P+PA+H L + MV++ AA T+ ++
Sbjct: 88 KQNRVLLNLPHIVTACRRAGFAPHVMNLRRQTPLPAIHAALSSADAMVAVHGAAVTHFLF 147
Query: 421 V 423
+
Sbjct: 148 M 148
>01_01_0097 - 741881-742977,743100-743320,743438-744156
Length = 678
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 552 IPINNRSVPIKHNVCIKDILLQLRTRFAGVILSAVHELSAIDHNVDLISSCSRRY 388
IP+ P+ HN DI+ +R FA V +H S I H D + R +
Sbjct: 189 IPLGGWDSPLPHNASFSDIVRSMRNGFA-VHFPIIHRWSRIGHIKDCLMGSIRGF 242
>10_07_0091 -
12774590-12774664,12774971-12775134,12775249-12775382,
12775463-12775556,12775650-12775758,12776055-12776103,
12778336-12778376,12779539-12779571,12779665-12779754,
12780474-12780507,12781218-12781510,12781859-12782057,
12782129-12782289,12783130-12783282,12783545-12783715,
12783822-12783921,12784023-12784111,12784192-12784290,
12784406-12784676,12784764-12784961,12785041-12785140,
12785799-12785931,12786016-12786277,12787106-12787155
Length = 1033
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 436 RELMDCTKNDTGEPCPELKEYIFNTNVVFDRNG 534
R+LMD + + T E CP ++ I ++ V D NG
Sbjct: 596 RKLMDDSLSQTAEACPLIENLILSSCVSIDLNG 628
>03_02_0334 +
7570568-7570709,7571622-7571844,7572178-7572257,
7572869-7572929,7573670-7573796
Length = 210
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 356 CNAGIGYCFKIPCNGATKLVLLLVRVSS 273
C+ + C+K+PC G+ KL L+ R S
Sbjct: 101 CHNDVRVCYKLPCEGSPKLNLVYRREDS 128
>12_02_0453 +
19192060-19192301,19192477-19192559,19193246-19193328,
19193616-19193668,19194041-19194169,19194585-19194643,
19195317-19195429,19195571-19195663,19195810-19195912,
19196233-19196315,19196407-19196448
Length = 360
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 502 FNTNVVFDRNGAVIDRYRKINLF 570
+NT+V+ D +G + YRKI+LF
Sbjct: 176 YNTHVLIDDSGEIRSSYRKIHLF 198
>08_01_1048 +
10624027-10624575,10625332-10625522,10626044-10626539,
10626664-10626749,10626853-10627033
Length = 500
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 337 YPIPALHPNLYDNIMVSISAAARTNQIYVVVNGRELMDCTKNDTGEPCPELKEYIFNTNV 516
+P+ L + Y ++V + A+AR Q+Y + D D + PE EY V
Sbjct: 124 FPVVQLLRDRYPGVVVDVVASARGKQVYEMCKNVRYADV--YDPDDDWPEPAEYTHQLGV 181
Query: 517 VFDR 528
+ +R
Sbjct: 182 LKNR 185
>07_03_0562 + 19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 196 VDQNIRNYVRYIEEAAKQNADIIVFPELTLTNRSTS 303
V Q R V+ + E+ QN +++FP+L T+ S S
Sbjct: 932 VPQFFRQPVQMVRESPGQNKGLVIFPQLVQTDFSRS 967
>06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 282 PDQQKHKFCSAVTWYFKTIPD 344
PDQ K +F A++ YF T+PD
Sbjct: 1541 PDQYKKRFRKAMSRYFLTVPD 1561
>02_05_1291 -
35516715-35517251,35517339-35518185,35518480-35519009,
35519092-35519529
Length = 783
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 103 FVSLTKTSFQKSTPQDSQYVAAAVEYIVSGDVDQNIRNYVRYIEEAAKQNADIIVFPELT 282
F T ++ STP ++ I ++N Y+R++ EAA DI ++
Sbjct: 217 FCEKTNVEWESSTPDGFRHYNLTKLTIYGFQPNENFMGYIRHVMEAAVNLEDISLYDRKV 276
Query: 283 L 285
L
Sbjct: 277 L 277
>12_02_0469 -
19424703-19424906,19425073-19425142,19425409-19426302,
19426975-19427124,19427382-19427572,19427713-19427835
Length = 543
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 433 GRELMDCTKNDTGEPCPELKEYIFNTNVVFDRNGAVIDRYRKINLFGESSHTP 591
G EL D N E E+KEY+ + + A ++ ++ GE+SH P
Sbjct: 352 GSELFDLASNSC-ELFGEVKEYMESQLSKISSSNAATKKHTHVDEVGETSHRP 403
>11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 421 VVVNGRELMDCTKNDTGEPCPELKEYIFNTNVVFDRNGAVIDR 549
+ ++G EL +C N + CP LKE F N FD ++ R
Sbjct: 1268 IELSGIELKNCFLNFSS--CPALKELYFTKNCGFDSVYEILSR 1308
>05_01_0217 +
1630083-1630205,1630467-1630710,1631695-1632508,
1632775-1632844,1633007-1633239,1633345-1633564
Length = 567
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 433 GRELMDCTKNDTGEPCPELKEYIFNTNVVFDRNGAVIDRYRKINLFGESSHTP 591
G EL D N E E+KEY+ + + A ++ ++ GE+SH P
Sbjct: 293 GSELFDLASNSR-ELFREVKEYMESQLSKISSSNAATKKHTHVDEVGETSHRP 344
>11_04_0215 + 14944039-14944227,14944444-14944905,14945513-14945713
Length = 283
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 109 SLTKTSFQKSTPQDSQYVAAAVEYIVSGDVDQNIRNYVRYIEEAAKQNADIIVFPELTLT 288
S ++SFQ P++ + + + + GD+ +N N + Y E K + F E+ +
Sbjct: 163 STVESSFQSLEPEEEEIHSPEIPFQFRGDLYENYENTLNYSSE-KKAHPKNEPFEEIEIK 221
Query: 289 N 291
N
Sbjct: 222 N 222
>11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,
4584344-4584465,4584547-4584654,4585975-4586119,
4586786-4586869,4586997-4587345,4587527-4587666,
4587784-4588037,4588409-4588576,4588686-4588976,
4589329-4589538,4589778-4589860,4590288-4590414,
4593624-4595516,4596274-4596395,4596487-4596628,
4596719-4596940,4597489-4597563,4598351-4598452,
4598616-4598819
Length = 1730
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 252 CGHHSFPRTDPDQQKHKFCSAVTWYFKTIPDTCITSEL 365
C FPR D F + YF T+PD ++ EL
Sbjct: 967 CYDAGFPRADGHPCPTLFANWFPVYFSTVPDDSLSDEL 1004
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 508 TNVVFDRNGAVIDRYRKINLFGESSHTPALTPD 606
T + +DR +ID +R+I F S H P PD
Sbjct: 31 TVITYDRRSLIIDGHREI-FFSGSIHYPRSPPD 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,007
Number of Sequences: 37544
Number of extensions: 310738
Number of successful extensions: 778
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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