Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M09
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z66562-3|CAD44123.1|  485|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z66562-1|CAA91464.1|  519|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass...    28   6.5  
AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical...    28   6.5  
AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    28   6.5  
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p...    27   8.6  
AF003151-18|AAK18915.1|  160|Caenorhabditis elegans Hypothetical...    27   8.6  

>Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical
           protein R74.6 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +1

Query: 211 RNYVRYIEEAAKQNADIIVFPELTLTNRSTSFVAPLHGILKQYPIPAL 354
           R YVR +E   +QN  + +F  + ++    + +     IL+ +P+P L
Sbjct: 327 RKYVRLVESVREQNGKVHIFSSMHVSGEQLAQLTGCAAILR-FPMPDL 373


>Z66562-3|CAD44123.1|  485|Caenorhabditis elegans Hypothetical
           protein F42E11.2c protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 22/73 (30%), Positives = 37/73 (50%)
 Frame = +1

Query: 73  IMKGFIFCLLFVSLTKTSFQKSTPQDSQYVAAAVEYIVSGDVDQNIRNYVRYIEEAAKQN 252
           + +G    +  +  TK S+Q ST Q SQ+  AA+   V     +N+ + V ++E    +N
Sbjct: 108 VNRGMSISINSIINTKKSYQISTAQISQFQEAALNTTVH---LKNLEDTV-HVESKKTKN 163

Query: 253 ADIIVFPELTLTN 291
           A I+   +  LTN
Sbjct: 164 ATIVQQIDQILTN 176


>Z66562-1|CAA91464.1|  519|Caenorhabditis elegans Hypothetical
           protein F42E11.2a protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 22/73 (30%), Positives = 37/73 (50%)
 Frame = +1

Query: 73  IMKGFIFCLLFVSLTKTSFQKSTPQDSQYVAAAVEYIVSGDVDQNIRNYVRYIEEAAKQN 252
           + +G    +  +  TK S+Q ST Q SQ+  AA+   V     +N+ + V ++E    +N
Sbjct: 108 VNRGMSISINSIINTKKSYQISTAQISQFQEAALNTTVH---LKNLEDTV-HVESKKTKN 163

Query: 253 ADIIVFPELTLTN 291
           A I+   +  LTN
Sbjct: 164 ATIVQQIDQILTN 176


>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 162 protein.
          Length = 2643

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +1

Query: 325  ILKQYPIPALHPNLYDNIMVSISAAARTNQIYVVVNGRELMDCTKN 462
            ++++Y   +LH ++    ++ + A A+ + +YVV    E+  C  N
Sbjct: 2007 LIQKYRAHSLHSDIGKKRILKLVADAKNDLVYVVTRQNEVWKCATN 2052


>AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18b protein.
          Length = 586

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 220 VRYIEEAAKQ-NADIIVFPELTLTNRSTSFVAPL 318
           VRY +EA    N DI    +L +T R  +FVA +
Sbjct: 449 VRYFDEAMSHPNVDIAKLTDLVITTRPPNFVAQI 482


>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 220 VRYIEEAAKQ-NADIIVFPELTLTNRSTSFVAPL 318
           VRY +EA    N DI    +L +T R  +FVA +
Sbjct: 809 VRYFDEAMSHPNVDIAKLTDLVITTRPPNFVAQI 842


>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
            protein C14B9.8 protein.
          Length = 1226

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 365  YTITLWCQYRRLQELIKSTLWSMAES-SWTALRMTPANLVRS*RSISLIQTLCLIGTERL 541
            Y   L CQ+  ++ L++       E+  W  +R+T   L +    +S   T  L+  +++
Sbjct: 816  YDTELGCQHITVRMLMEEVHTKACEAREWALVRLTAGLLKKQLEELSKAVTHLLVRQKQI 875

Query: 542  LIGIA 556
             +GIA
Sbjct: 876  TVGIA 880


>AF003151-18|AAK18915.1|  160|Caenorhabditis elegans Hypothetical
           protein D1007.9 protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 564 SFRGKFAHACSDAGLGLLRNRFW 632
           SF G   H CSD  +G+L   FW
Sbjct: 38  SFWGGRDHVCSDFEIGILEKGFW 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,780,472
Number of Sequences: 27780
Number of extensions: 278304
Number of successful extensions: 724
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)