Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M05
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0491 + 3506425-3506427,3506610-3506810,3507517-3507732           30   1.8  
06_01_0465 - 3304417-3306834                                           29   4.2  
01_01_0307 + 2513678-2513772,2514064-2514682                           28   5.6  
12_02_0580 + 20776820-20777247,20777341-20778109,20779280-207794...    28   7.4  
11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903...    28   7.4  
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535...    27   9.8  
11_08_0004 + 27518384-27519018,27519147-27519397,27520437-275205...    27   9.8  

>06_01_0491 + 3506425-3506427,3506610-3506810,3507517-3507732
          Length = 139

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +2

Query: 461 ISTWGGNQS-SVDILIKPNVVQNIT 532
           I  WGGN   SVDI + PN ++N+T
Sbjct: 8   IGPWGGNGGGSVDISVPPNSLKNVT 32


>06_01_0465 - 3304417-3306834
          Length = 805

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 TIERDHEPKKIDYSGSQVWQVSTTKSGA 424
           T  +D     +DY+G+ VW  +TT +GA
Sbjct: 98  TFRKDGGLALVDYNGTVVWSTNTTATGA 125


>01_01_0307 + 2513678-2513772,2514064-2514682
          Length = 237

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 155 PPRTTRPFASWIPWLLNVKFGFDCRAGCGGL 63
           P R  +P A W+   LNV   FD  +G GGL
Sbjct: 73  PRRWEKPHAGWMK--LNVDGSFDLNSGSGGL 101


>12_02_0580 +
           20776820-20777247,20777341-20778109,20779280-20779447,
           20779877-20780236
          Length = 574

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -2

Query: 198 CSSLIRGELRTTVRAAKNNTTVCLLDPMATERKVRF*LQSWLRGASTNRRLSAALQ*CD 22
           C+++   ELR TVR      TV  +  + T  K+R  + +W  G +    L+  +  C+
Sbjct: 385 CTAVDHLELRLTVRVLPAEDTVKDIPHLPTVTKLRLDVNTWWYGHTIGATLARIIAKCN 443


>11_06_0115 +
           20288220-20288303,20289223-20289706,20290160-20290393,
           20291811-20292770,20292931-20293404,20293406-20294664
          Length = 1164

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 134 FASWIPWLLNVKFGFDCRAGCGGLRRTAASQPRFN 30
           F SW+ W++++K       GC  L     SQ +F+
Sbjct: 171 FPSWLQWMVDIKILDIWNTGCKQLMHLDLSQSKFH 205


>11_08_0007 +
           27551173-27551828,27552071-27552282,27553371-27553550,
           27555154-27556187
          Length = 693

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 246 ATGCLTELRCGHSSPGCSSLIRGELRT 166
           A GC   L C HS+ G  S++ G++++
Sbjct: 512 AVGCAEALACMHSNIGHKSVVHGDVKS 538


>11_08_0004 +
           27518384-27519018,27519147-27519397,27520437-27520559,
           27523499-27524529
          Length = 679

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 246 ATGCLTELRCGHSSPGCSSLIRGELRT 166
           A GC   L C HS+ G  S++ G++++
Sbjct: 498 AVGCAEALACMHSNIGHKSVVHGDVKS 524


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,691,818
Number of Sequences: 37544
Number of extensions: 324848
Number of successful extensions: 969
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)