Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M05
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical pr...    33   0.18 
L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z66567-8|CAA91494.1|  402|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z66561-9|CAA91462.1|  402|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical
           protein ZC262.3a protein.
          Length = 773

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 334 YYYCIFNNCGWGRIVS*EVLCQCLFCLVISYRLSYRIALW 215
           Y Y +FN+  WG + +  ++C   F L I++ L+ + ALW
Sbjct: 486 YSYDVFNSVFWGGLATSLIVCLISFLLNITWILTRKSALW 525


>L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical
           protein ZC262.3b protein.
          Length = 624

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 334 YYYCIFNNCGWGRIVS*EVLCQCLFCLVISYRLSYRIALW 215
           Y Y +FN+  WG + +  ++C   F L I++ L+ + ALW
Sbjct: 486 YSYDVFNSVFWGGLATSLIVCLISFLLNITWILTRKSALW 525


>Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical
           protein H02I12.4 protein.
          Length = 303

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +2

Query: 461 ISTWGGNQSS--VDILIKPNVVQNITRVFKRESIXYNVVI 574
           IST   N+ S   ++++KPNVV N+TR+    +  YN++I
Sbjct: 40  ISTDVQNEESNVFEVILKPNVVFNVTRIPVDFNKTYNLII 79


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +2

Query: 494 DILIKPNVVQNITRVFKRESIXYNVVIXDLQKRI--NEENPP 613
           DI++  + ++ +  V K  +I Y+V+I D+ K I   E  PP
Sbjct: 74  DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPP 115


>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +2

Query: 494 DILIKPNVVQNITRVFKRESIXYNVVIXDLQKRI--NEENPP 613
           DI++  + ++ +  V K  +I Y+V+I D+ K I   E  PP
Sbjct: 74  DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPP 115


>Z66567-8|CAA91494.1|  402|Caenorhabditis elegans Hypothetical
           protein ZK455.6 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 419 GARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVQNITRVFKRE 550
           G +  + +L+R ++     G   S+D L  PNV  +++ +FK E
Sbjct: 78  GMKIELVQLQRDSIGRKKSGASISIDPLFTPNVASSLSAIFKNE 121


>Z66561-9|CAA91462.1|  402|Caenorhabditis elegans Hypothetical
           protein ZK455.6 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 419 GARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVQNITRVFKRE 550
           G +  + +L+R ++     G   S+D L  PNV  +++ +FK E
Sbjct: 78  GMKIELVQLQRDSIGRKKSGASISIDPLFTPNVASSLSAIFKNE 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,886,615
Number of Sequences: 27780
Number of extensions: 269454
Number of successful extensions: 595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)