Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M04
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 213 4e-54
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 177 2e-43
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 165 8e-40
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 159 4e-38
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 142 9e-33
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 2e-31
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 4e-29
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 123 3e-27
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 120 2e-26
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 109 4e-23
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 106 4e-22
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 105 9e-22
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 105 9e-22
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 105 1e-21
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 101 1e-20
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 98 1e-19
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 97 2e-19
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 97 3e-19
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 96 6e-19
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 95 1e-18
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 95 1e-18
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 95 1e-18
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 93 4e-18
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 93 7e-18
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 93 7e-18
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 7e-18
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 7e-18
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 93 7e-18
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 93 7e-18
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 92 9e-18
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 92 9e-18
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 92 1e-17
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 91 2e-17
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 91 2e-17
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 91 2e-17
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 91 2e-17
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 91 3e-17
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 90 4e-17
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 90 4e-17
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 90 5e-17
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 90 5e-17
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 89 9e-17
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 89 9e-17
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 89 9e-17
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 89 9e-17
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 89 1e-16
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 89 1e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 88 1e-16
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 88 1e-16
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 88 1e-16
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 88 2e-16
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 88 2e-16
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 87 3e-16
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 87 3e-16
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 87 3e-16
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 86 6e-16
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 86 6e-16
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 86 8e-16
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 86 8e-16
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 85 1e-15
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 85 1e-15
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 85 1e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 85 1e-15
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 85 1e-15
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 85 1e-15
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 85 2e-15
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 85 2e-15
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 85 2e-15
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 84 2e-15
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 84 2e-15
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 84 3e-15
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 84 3e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 84 3e-15
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 84 3e-15
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 84 3e-15
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 83 6e-15
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 83 6e-15
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 83 6e-15
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 83 6e-15
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 83 7e-15
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 83 7e-15
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 83 7e-15
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 83 7e-15
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 82 1e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 82 1e-14
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 82 1e-14
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 82 1e-14
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 82 1e-14
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 82 1e-14
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 82 1e-14
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 82 1e-14
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 81 2e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 81 2e-14
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 81 2e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 2e-14
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 81 2e-14
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 81 2e-14
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 81 2e-14
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 81 2e-14
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 81 2e-14
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 81 2e-14
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 81 2e-14
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 81 2e-14
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 81 3e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 81 3e-14
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 80 4e-14
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 80 4e-14
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 80 4e-14
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 80 4e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 80 5e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 80 5e-14
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 80 5e-14
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 80 5e-14
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 80 5e-14
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 80 5e-14
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 80 5e-14
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 79 7e-14
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 79 7e-14
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 79 7e-14
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 7e-14
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 79 7e-14
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 79 9e-14
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 79 9e-14
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 79 9e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 79 1e-13
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 79 1e-13
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 79 1e-13
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 78 2e-13
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 78 2e-13
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 78 2e-13
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 78 2e-13
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 78 2e-13
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 78 2e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 78 2e-13
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 78 2e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 78 2e-13
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 78 2e-13
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 78 2e-13
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 78 2e-13
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 77 3e-13
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 77 3e-13
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 3e-13
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 77 3e-13
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 77 3e-13
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 77 3e-13
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 77 3e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 77 4e-13
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 77 4e-13
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 77 5e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 77 5e-13
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 77 5e-13
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 77 5e-13
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 77 5e-13
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 5e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 76 6e-13
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 76 6e-13
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 76 6e-13
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 76 6e-13
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 76 6e-13
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 6e-13
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 76 8e-13
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 76 8e-13
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 76 8e-13
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 76 8e-13
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 76 8e-13
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 76 8e-13
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 75 1e-12
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 75 1e-12
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 75 1e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 75 1e-12
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 75 1e-12
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 75 1e-12
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 75 1e-12
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 75 1e-12
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 75 1e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 75 1e-12
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 75 1e-12
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 75 1e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 75 2e-12
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 75 2e-12
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 75 2e-12
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 75 2e-12
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 75 2e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 75 2e-12
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 75 2e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 75 2e-12
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 75 2e-12
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 75 2e-12
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 75 2e-12
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 75 2e-12
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 75 2e-12
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 75 2e-12
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 75 2e-12
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 74 3e-12
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 74 3e-12
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 74 3e-12
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 74 3e-12
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 74 3e-12
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 74 3e-12
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 74 3e-12
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 74 3e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 74 3e-12
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 5e-12
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 73 5e-12
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 73 5e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 5e-12
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 73 5e-12
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 73 6e-12
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 6e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 73 6e-12
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 73 6e-12
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 73 6e-12
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 73 6e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 73 8e-12
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 73 8e-12
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 73 8e-12
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 73 8e-12
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 73 8e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 73 8e-12
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 73 8e-12
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 73 8e-12
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 72 1e-11
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 72 1e-11
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 72 1e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 72 1e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 72 1e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 72 1e-11
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 72 1e-11
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 72 1e-11
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 72 1e-11
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 72 1e-11
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 72 1e-11
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 72 1e-11
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 71 2e-11
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 71 2e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 71 2e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 2e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 71 2e-11
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 71 2e-11
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 71 2e-11
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 71 2e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 71 3e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 71 3e-11
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 71 3e-11
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 70 4e-11
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 70 4e-11
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 70 4e-11
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 70 4e-11
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 70 4e-11
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 70 4e-11
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 70 4e-11
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 70 4e-11
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 70 4e-11
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 70 4e-11
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 70 4e-11
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 70 4e-11
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 70 6e-11
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 70 6e-11
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 70 6e-11
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 70 6e-11
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 70 6e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 70 6e-11
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 70 6e-11
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 69 7e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 7e-11
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 7e-11
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 69 7e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 69 7e-11
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 69 1e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 69 1e-10
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 69 1e-10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 69 1e-10
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 69 1e-10
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 69 1e-10
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 69 1e-10
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 69 1e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 69 1e-10
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 69 1e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 69 1e-10
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 68 2e-10
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 68 2e-10
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 68 2e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 68 2e-10
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 68 2e-10
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 68 2e-10
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 68 2e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 68 2e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 2e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 68 2e-10
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 68 2e-10
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 68 2e-10
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 68 2e-10
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 68 2e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 68 2e-10
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 68 2e-10
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 68 2e-10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 67 3e-10
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 3e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 67 3e-10
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 67 3e-10
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 67 4e-10
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 67 4e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 67 4e-10
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 67 4e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 67 4e-10
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 67 4e-10
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 66 5e-10
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 5e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 66 5e-10
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 5e-10
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 5e-10
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 66 5e-10
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 66 5e-10
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 66 5e-10
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 66 5e-10
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 66 5e-10
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 5e-10
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 66 5e-10
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 66 7e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 66 7e-10
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 66 7e-10
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 66 9e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 66 9e-10
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 66 9e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 65 1e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 65 1e-09
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 1e-09
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 1e-09
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 65 1e-09
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 1e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 65 1e-09
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 65 1e-09
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 65 1e-09
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 65 1e-09
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 65 2e-09
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 2e-09
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 65 2e-09
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 65 2e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 65 2e-09
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 65 2e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 65 2e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 65 2e-09
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 65 2e-09
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 64 2e-09
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 3e-09
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 64 3e-09
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 3e-09
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 64 3e-09
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 64 3e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 3e-09
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 64 3e-09
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 64 4e-09
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 64 4e-09
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 64 4e-09
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 64 4e-09
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 64 4e-09
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 64 4e-09
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 64 4e-09
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 64 4e-09
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 63 5e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 63 5e-09
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 63 5e-09
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 63 5e-09
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 63 5e-09
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 63 5e-09
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 63 5e-09
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 63 5e-09
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 5e-09
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 63 5e-09
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 63 5e-09
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 63 5e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 63 6e-09
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 63 6e-09
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 63 6e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 63 6e-09
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 6e-09
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 63 6e-09
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 62 8e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 62 8e-09
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 8e-09
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 8e-09
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 62 8e-09
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 62 8e-09
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 62 8e-09
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 62 8e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 62 8e-09
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 62 8e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 62 8e-09
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 62 1e-08
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 62 1e-08
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 62 1e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 62 1e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 62 1e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 62 1e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 62 1e-08
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 62 1e-08
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 62 1e-08
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 1e-08
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 62 1e-08
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 62 1e-08
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 1e-08
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 62 1e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 62 1e-08
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 62 1e-08
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 61 2e-08
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 61 2e-08
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 61 2e-08
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 61 2e-08
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 61 2e-08
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 61 3e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 61 3e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 61 3e-08
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 61 3e-08
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 61 3e-08
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 61 3e-08
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 61 3e-08
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 61 3e-08
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 213 bits (519), Expect = 4e-54
Identities = 100/140 (71%), Positives = 120/140 (85%)
Frame = +1
Query: 148 MTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 327
M +S + + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 328 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 508 LALGDFMNVQCHACIGGTNL 567
LALGD+MNVQCHACIGGTN+
Sbjct: 127 LALGDYMNVQCHACIGGTNV 146
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMIR 646
DIRKLDYGQHVV+GTPGRVFDMIR
Sbjct: 149 DIRKLDYGQHVVAGTPGRVFDMIR 172
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 177 bits (431), Expect = 2e-43
Identities = 81/119 (68%), Positives = 98/119 (82%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
SILQ L+ +ETQ L+L+PTRELA QIQKVILALGD+M CHACIGGTN+ +++
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKL 148
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 165 bits (401), Expect = 8e-40
Identities = 84/165 (50%), Positives = 116/165 (70%)
Frame = +1
Query: 49 SFPLLI*KFRF*EIFTYRITCYFKNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSED 228
SFPLL K + EI YR+ K++ A M + +D + F+T+E
Sbjct: 215 SFPLLQLKSKSKEIGRYRVR--EKSMAATATTSMVPANRGGCRNSAVDD-EKLVFETTEG 271
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
VE+I +FD MG++++LLRGIY Y FEKPSA+QQR++LPI++G DVIAQAQSGTGKT+ F+
Sbjct: 272 VELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFA 331
Query: 409 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 543
+++ Q +DT+ RE Q LI SPTRELA+Q +KVILA+GD +N+Q H
Sbjct: 332 LTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 159 bits (387), Expect = 4e-38
Identities = 84/140 (60%), Positives = 103/140 (73%)
Frame = +1
Query: 148 MTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 327
M +S + + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 328 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 508 LALGDFMNVQCHACIGGTNL 567
LALGD+MNVQCHACIGGTN+
Sbjct: 106 LALGDYMNVQCHACIGGTNV 125
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMIR 646
DIRKLDYGQHVV+GTPGRVFDMIR
Sbjct: 128 DIRKLDYGQHVVAGTPGRVFDMIR 151
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 142 bits (343), Expect = 9e-33
Identities = 66/130 (50%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Frame = +1
Query: 190 EDLSNVEFDTSED-----VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 354
E L N+ ++D +E + TF+ + L +LLRGI++YGFE+PSAIQQ++I PI+ G
Sbjct: 34 EHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG 93
Query: 355 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNV 534
+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+ +G ++N+
Sbjct: 94 KDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNI 153
Query: 535 QCHACIGGTN 564
+ CIGGT+
Sbjct: 154 EAFCCIGGTS 163
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 2e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKV 504
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 130 bits (313), Expect = 4e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E+ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 32 EITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 91
Query: 412 SILQTLDTTLRETQVLILSPTRELATQ 492
SILQ L+ +ETQ L+L+PTRELA Q
Sbjct: 92 SILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 123 bits (297), Expect = 3e-27
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILA 513
LQ +D +TQ +IL+PTRELA QIQKV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 120 bits (290), Expect = 2e-26
Identities = 56/122 (45%), Positives = 84/122 (68%)
Frame = +1
Query: 202 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 381
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 382 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 561
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC G
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGN 128
Query: 562 NL 567
++
Sbjct: 129 SI 130
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 109 bits (263), Expect = 4e-23
Identities = 57/135 (42%), Positives = 88/135 (65%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 363
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 364 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 543
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 544 ACIGGTNLXXRYKEI 588
AC+GG +L K +
Sbjct: 117 ACVGGNSLGADVKAL 131
Score = 32.7 bits (71), Expect = 7.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 566 LXXDIRKLDYGQHVVSGTPGRVFDMIR 646
L D++ L G H VSGTPGR+ +++
Sbjct: 124 LGADVKALQKGIHCVSGTPGRILQLLK 150
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 106 bits (255), Expect = 4e-22
Identities = 53/89 (59%), Positives = 65/89 (73%)
Frame = +1
Query: 277 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 456
L + G EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L+ L + Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQA 83
Query: 457 LILSPTRELATQIQKVILALGDFMNVQCH 543
L+L+PTRELA QI+KV+ ALGD +NV+ +
Sbjct: 84 LVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 105 bits (252), Expect = 9e-22
Identities = 51/114 (44%), Positives = 74/114 (64%)
Frame = +1
Query: 220 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 400 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 561
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM + GG+
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGS 144
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 105 bits (252), Expect = 9e-22
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 567
++T+L Q LIL PTRELA Q +V LG + N+Q GGT L
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTL 145
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (251), Expect = 1e-21
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 459
+ + +YGFEKPS IQQ I+PI+KG+D IAQAQSGTGKTATFSI+ LQ +DT+ TQ L
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 460 ILSPTRELATQ-IQKVILALG 519
IL+PTRELA Q I ++ LG
Sbjct: 107 ILAPTRELAQQTITRIFFILG 127
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 105 bits (251), Expect = 1e-21
Identities = 51/108 (47%), Positives = 69/108 (63%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ L + Q LI+ PTRELA Q +V+ LG + C GGTNL
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNL 154
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 101 bits (243), Expect = 1e-20
Identities = 52/107 (48%), Positives = 74/107 (69%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L+ ++ + LI++PTRELA QI + IL LG F ++ GG ++
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSI 152
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 98.3 bits (234), Expect = 1e-19
Identities = 54/137 (39%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 360
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 361 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQ 537
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI++VI +LG + ++
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 538 CHACIGGTNLXXRYKEI 588
+ IGG + K++
Sbjct: 124 VESFIGGVAMDIDRKKL 140
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 97.5 bits (232), Expect = 2e-19
Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 390
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 391 KTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQ 537
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 420
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+T+D + R TQ LIL+PTRELA Q+ + I ++ + GG ++ + +E+
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIREL 118
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 96.3 bits (229), Expect = 6e-19
Identities = 49/123 (39%), Positives = 76/123 (61%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 363
L +S V D + + V F MGL DELL+ IY GFEKPS IQ+ +I I++G +V
Sbjct: 32 LDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNV 91
Query: 364 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 543
+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI L + ++
Sbjct: 92 VVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIKVF 150
Query: 544 ACI 552
+ +
Sbjct: 151 SAL 153
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/148 (33%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Frame = +1
Query: 127 EANXIRKMTSSE-VSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 303
EA+ I+ +E + +N + L++++ D + + + +F + L ++L++GI GF
Sbjct: 109 EASDIQLQDDTEGLITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGF 168
Query: 304 EKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 477
+KPS IQ++++ ++ R++I Q+QSGTGKTA F++++L +D T+ Q + ++P+R
Sbjct: 169 QKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSR 228
Query: 478 ELATQIQKVILALGDFMNVQCHACIGGT 561
ELA QIQ+VI +G F V I G+
Sbjct: 229 ELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 411
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALG 519
+L +D + + TQ L+L+PTRELATQI V +G
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIG 185
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 95.1 bits (226), Expect = 1e-18
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 360
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 361 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 537
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 538 CHACIGGTNL 567
CH IGGT L
Sbjct: 162 CHVFIGGTPL 171
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 93.5 bits (222), Expect = 4e-18
Identities = 45/115 (39%), Positives = 73/115 (63%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L R Q L+L+PTRELA Q+ + I +G V+ A GG ++ + + +
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSL 121
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 92.7 bits (220), Expect = 7e-18
Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 360
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 361 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 537
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 538 CHACIGGTNL 567
CH IGGT L
Sbjct: 163 CHVFIGGTPL 172
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 92.7 bits (220), Expect = 7e-18
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 409 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGG 558
+ +LQ +D R Q L+L PTRELA Q+ + AL + V+ + GG
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGG 111
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 92.7 bits (220), Expect = 7e-18
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = +1
Query: 241 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 420
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALG 519
LD RE QVL+L+PTRELA Q+ + G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 92.7 bits (220), Expect = 7e-18
Identities = 46/115 (40%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLXXRYKEI 588
+RE QVL+L+PTRELA Q+ + + NV+ + GG++ +++ +
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRAL 122
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 92.7 bits (220), Expect = 7e-18
Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 427 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + LILSPTRELA Q K I LG FM ++ +GG ++ ++ I
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAI 156
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 92.7 bits (220), Expect = 7e-18
Identities = 49/139 (35%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +1
Query: 124 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 303
+E ++ S+ +SS ++ + L++++ D + + +FD +GL ELL+GIY F
Sbjct: 54 VEEKKTKQEDSNLISSEYEVKVK-LADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKF 112
Query: 304 EKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 477
+KPS IQ+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+R
Sbjct: 113 QKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSR 172
Query: 478 ELATQIQKVILALGDFMNV 534
ELA Q +V+ +G F +
Sbjct: 173 ELARQTLEVVQEMGKFTKI 191
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 92.3 bits (219), Expect = 9e-18
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 115 FKNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYT 294
F E + I K+ +S++ + D + D + + TF + L++ LL+GI
Sbjct: 37 FTRAEISYINKLLNSKLFETHDL---DFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAA 93
Query: 295 YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILS 468
GF KPS IQ+R++ ++ +++IAQ+QSGTGKTATF +++L + T + Q L ++
Sbjct: 94 MGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMA 153
Query: 469 PTRELATQIQKVILALGDFM 528
PTRELA QI+ V + FM
Sbjct: 154 PTRELALQIESVGRQMAQFM 173
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 92.3 bits (219), Expect = 9e-18
Identities = 48/108 (44%), Positives = 67/108 (62%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
ILQ L + LIL+PTREL QI + ILA+G + V +GG
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGG 156
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGG 558
LD L+ Q+L+L+PTRELA Q+ + + M V A GG
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 112
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L +IL+PTRELA QI + A+G MNV C IGG
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGG 109
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 427 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L T +T + LILSPTRELA Q Q+ I +G F ++ +GG ++ ++ I
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAI 155
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 423
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
LD ++ Q L+++PTRELA QI + LG + + +GG +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVS 108
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 420
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 421 QTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
Q +D + + TQ LI++PTREL QI ++ L V+ A GG+N+ + +EI
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREI 118
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 427 LDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L ++
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQF 183
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/132 (32%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +1
Query: 196 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 376 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 552
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G D ++
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 553 GGTNLXXRYKEI 588
GG + +++++
Sbjct: 120 GGQSYGPQFQQL 131
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 567
+D Q L+L PTRELA Q+ ++ + + + V+ A GGTNL
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL 198
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 90.2 bits (214), Expect = 4e-17
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 412 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
+L+ L D+ R +VLIL PTRELA Q Q V+ L F N+ +GG L + +
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGG--LSNKAQ 304
Query: 583 EIGLR 597
E+ LR
Sbjct: 305 EVELR 309
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 89.8 bits (213), Expect = 5e-17
Identities = 49/150 (32%), Positives = 85/150 (56%)
Frame = +1
Query: 139 IRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 318
+ ++++ E S K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 319 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 498
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI+
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 499 KVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ ALG M ++ IGG ++ + +++
Sbjct: 184 ETFDALGSSMGLRSVCIIGGMSMMEQARDL 213
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 89.8 bits (213), Expect = 5e-17
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 424 TLDTT------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L T R + LIL+PTRELA QI + + ++N++ GG ++
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 89.0 bits (211), Expect = 9e-17
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 427 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L+T E + LI+ PTRELA Q KV LG N++ IGG+ L ++ +
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNL 129
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 89.0 bits (211), Expect = 9e-17
Identities = 43/100 (43%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSI 411
+ +F+ + L+ ELL GI + GF KPS+IQ+R++ +++ +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN 531
++L +D Q L ++PTREL QI +V + + FMN
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 89.0 bits (211), Expect = 9e-17
Identities = 41/115 (35%), Positives = 70/115 (60%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+DT Q ++++PTRELA Q+ + + +G V+ GG ++ + + +
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 89.0 bits (211), Expect = 9e-17
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 423
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGG 558
+L TQVL+L+PTRE+A QI V++A+G M ++CH IGG
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGG 132
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Frame = +1
Query: 193 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 360
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 361 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 537
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q + L LG FM +V+
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVK 172
Query: 538 CHACIGG 558
GG
Sbjct: 173 VECFYGG 179
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/125 (36%), Positives = 73/125 (58%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 394 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXX 573
TA F+I IL L IL+PTRELA QI++ +LG M V+ +GG N+
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
Query: 574 RYKEI 588
+ +++
Sbjct: 192 QARDL 196
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 88.2 bits (209), Expect = 1e-16
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 427 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
D + + + LIL+PTRELA Q+ + ++ LG + GG
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGG 111
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
L ++ QVLIL+P REL QI + + LG + N + GG L K +
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSL 121
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = +1
Query: 256 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 429
MGL++ LLRGIY YG EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 87.8 bits (208), Expect = 2e-16
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 424 TLDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L + R + LIL+PTRELA QIQ+ A G + ++ GG
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGG 109
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 423
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLXXRYKEI 588
+D R TQ LILSPTREL QI + + + A GG ++ + ++I
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDI 119
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+SMGL EL R I + GF P+ IQ+++I I+ GRD++A +++G+GKTA F I ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 427 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L +T+ + LIL PTRELA QI V+ AL F ++Q +GG +++ +
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESL 127
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/105 (40%), Positives = 62/105 (59%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L + L+L TRELA QI+ LG F N + A GG
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGG 143
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 87.0 bits (206), Expect = 3e-16
Identities = 46/119 (38%), Positives = 70/119 (58%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+++ + T R Q LIL+PTRELA Q+ I L ++ GG ++ + K +
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKAL 120
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 86.2 bits (204), Expect = 6e-16
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Frame = +1
Query: 220 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 400 TFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+F++ +LQ L R + LIL PTRELA Q+ + G ++ + IGG ++
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESM 402
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 86.2 bits (204), Expect = 6e-16
Identities = 49/114 (42%), Positives = 70/114 (61%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ Q L+L PTRELA Q+ + I +L M +Q A GG ++ + + +
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSL 118
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 86.2 bits (204), Expect = 6e-16
Identities = 39/115 (33%), Positives = 70/115 (60%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ R L++ PTRELA Q+ + AL ++ A GG ++ + +++
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKL 135
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 86.2 bits (204), Expect = 6e-16
Identities = 44/118 (37%), Positives = 70/118 (59%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLRT 600
+D + Q L+L PTRELA Q+++ + +G F ++ A G + KE+ +T
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKT 123
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 86.2 bits (204), Expect = 6e-16
Identities = 43/88 (48%), Positives = 57/88 (64%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 409 ISILQTLDTTLRETQVLILSPTRELATQ 492
I I++ LD + Q L+LSPTRELA Q
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 190 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 369
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 370 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 540
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 541 HACIGGTNLXXRYKEI 588
+GG + ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 85.8 bits (203), Expect = 8e-16
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 424 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGL 594
L + T+VLIL PTRELA Q V + F ++ CIGG +L + +E+
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 595 R 597
R
Sbjct: 380 R 380
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 85.4 bits (202), Expect = 1e-15
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 345
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 346 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 519
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 520 DFMNVQCHACIGGTNLXXRY 579
F ++ +GG ++ ++
Sbjct: 132 KFTKLKTALILGGDSMDDQF 151
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 424 TLDTTLRETQVLILSPTRELATQI 495
+DTT + Q L+L PTRELA Q+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQV 89
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+SMGL +E+ RG+ G+ P+ IQ++++ I+ G D+ A A++G+GKTA F + ++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 427 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + LILSPTR+LATQ K LG F +++ +GG ++ +++E+
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEEL 166
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 427 LDTTLRETQVLILSPTRELATQI 495
+D RE Q+LIL+PTRELA Q+
Sbjct: 85 IDPARREPQLLILAPTRELALQV 107
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
+D +R Q L+L PTRELA Q+ + + G M ++ + GG ++ + K +
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSL 125
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 85.0 bits (201), Expect = 1e-15
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISIL 420
+ + L +LL+GI GF KPS IQQ + LP++ G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCA-LPLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 540
++ + Q L + PTRELATQ +VI LG F ++C
Sbjct: 160 SKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 208 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 387
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 388 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
GKTA F++ +L L T Q L+L PTRELA Q+ + I G + + GG
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
Query: 559 TNLXXRYKEI 588
+ + + +
Sbjct: 166 APIGRQVRAL 175
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = +1
Query: 223 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 402
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 403 FSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
F + +L +D R Q L+L+PTRELA Q + I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 427 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
L + + L+LSPTREL+ QI + AL F++++ A +GG ++ +++
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFE 137
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 84.6 bits (200), Expect = 2e-15
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 424 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGL 594
L + T+VLIL+PTRELA QI +I L F +++C +GG L R +E+ L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGG--LSVREQEVVL 285
Query: 595 RT 600
R+
Sbjct: 286 RS 287
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + LILSPTRELA Q K I LG F ++ +GG N+ ++ I
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAI 153
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 84.2 bits (199), Expect = 2e-15
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 345
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 346 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 519
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 520 DFMNVQCHACIGGTNLXXRY 579
F ++ +GG + ++
Sbjct: 191 KFTGLKTALILGGDRMEDQF 210
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLXXRYKEI 588
I Q +DT+ RE Q +IL+PT ELA QI K I L+ ++V IG N+ + +++
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/117 (37%), Positives = 72/117 (61%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLR 597
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A GG + + + GLR
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR--GLR 117
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 83.8 bits (198), Expect = 3e-15
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 414
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
+L +D RE Q LIL+PTRELA QI + + + + GG N+ + ++I
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDI 130
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/115 (34%), Positives = 69/115 (60%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
++ Q L+++PTRELA Q+ + + +G V+ GG ++ + + +
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRAL 117
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 83.8 bits (198), Expect = 3e-15
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 384
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 385 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGT 561
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F ++VQ I G
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGN 206
Query: 562 NL 567
+
Sbjct: 207 RI 208
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 567
LD Q +++ PTRELA Q+ ++ + + M + A GGTNL
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL 190
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 420
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLXXRYKEI 588
Q ++ +L++TQVL+L PTREL Q+ K + + + + A GG + + K++
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKL 118
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
+D R+ QVL+L+PTRELA Q+ + A + ACI G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYG 114
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/121 (37%), Positives = 75/121 (61%)
Frame = +1
Query: 205 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 384
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 385 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
+GKTA F+I ILQ L + LIL+PTREL+ QI++ +++LG + + +GG +
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 565 L 567
+
Sbjct: 149 M 149
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 82.6 bits (195), Expect = 7e-15
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 414
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG V+ GG +
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGAS 152
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 82.6 bits (195), Expect = 7e-15
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 151 TSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 330
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 331 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVIL 510
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFK 160
Query: 511 A-LGDFMNVQCHACIGGTN 564
A +++ A GGT+
Sbjct: 161 AYAAGHPHLKVLAVYGGTD 179
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 82.6 bits (195), Expect = 7e-15
Identities = 43/111 (38%), Positives = 63/111 (56%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
ILQ LD E Q L+L PT +LA + Q VI LG F++ + HA GGT+
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTS 153
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 82.6 bits (195), Expect = 7e-15
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 384
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 385 TGKTATFSISILQTLD-TTLRETQVLILSPTRELATQIQKVILALGDF 525
TGKT F ++IL +D + Q L L+P+RELA QIQ VI ++G F
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF 193
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/116 (41%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 420
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLXXRYKE 585
+T++T QVLIL PTRE+A QI+ V+ ++G +N ++ + IGG L K+
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK 139
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/108 (36%), Positives = 64/108 (59%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
LD + Q ++L+PTRELA Q+ + ++ A GG ++
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSI 111
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 424 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ +T R + L+++PTRELA QI +LG ++ + GG N+ + + +
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRL 117
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 423
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLR 597
LD + Q L+L+PTRELA Q+ I +L + GG ++ + + + R
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRR 121
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 424 TLDTTLRETQVLILSPTRELATQI 495
+D + + Q+L+++PTRELA Q+
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQV 89
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/118 (30%), Positives = 72/118 (61%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLR 597
++ Q LI+ PTRELA Q++ I +G V+C A G ++ + E+ R
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR 121
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLXXRYKEI 588
+D + E Q +ILSPT EL QI V+ L G + +G N+ + +++
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKL 119
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 420
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 421 QTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ +D + + +I++PTRELA QI + + +L V+ GG +L ++K++
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDL 135
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/112 (35%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 424 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L + + + L+L+PTRELA Q+ + + G ++++ GG +
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKI 117
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
L QVLIL PTREL Q+ K I L M N++ + GG + K +
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSV 120
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/114 (32%), Positives = 69/114 (60%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ T + Q L++ PTRELA Q+ + + +G ++ A GG + + K +
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKAL 117
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 81.8 bits (193), Expect = 1e-14
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Frame = +1
Query: 223 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 402
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 403 FSISILQTLDTTLRETQ------------VLILSPTRELATQIQKVILALGDFMNVQCHA 546
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 547 CIGGTNLXXRYKEIGLR 597
+GG + + +G R
Sbjct: 123 LVGGIDRMQQTIALGKR 139
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/115 (34%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLXXRYKEI 588
+D ++ +TQ LIL PTRELA Q+ + L F ++ A GG ++ + +++
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDL 117
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 424 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L R + +I++PTRELA QIQ VI ALG + ++ GG
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGG 107
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 415 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLXXRYKEI 588
I Q +D++ RETQ LIL+PT EL QI K I L + + IG N+ + +++
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/86 (43%), Positives = 58/86 (67%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 427 LDTTLRETQVLILSPTRELATQIQKV 504
LD Q +++ PTRELA Q+ ++
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 81.4 bits (192), Expect = 2e-14
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Frame = +1
Query: 139 IRKMTSSEVSSNXKILSE-DLSNVEFDTSEDVEVIPT--FDSMGLRDELLRGIYT-YGFE 306
+ ++ E IL E + SN++ TS D F+ + L EL++G+Y FE
Sbjct: 54 LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFE 113
Query: 307 KPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRE 480
KPS IQ S+ I+ + +IAQA +G+GKT F + +L +D TLRE Q L + PTRE
Sbjct: 114 KPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRE 173
Query: 481 LATQIQKVILALGDFMNVQCHACI 552
LA Q +V+ +G F + +
Sbjct: 174 LANQNMEVLQKMGKFTGITAELAV 197
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + IL+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 424 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGL 594
L + T+V+IL+PTRELA Q V + L +++ +GG +L + E+ L
Sbjct: 354 RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRL 413
Query: 595 R 597
R
Sbjct: 414 R 414
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 81.0 bits (191), Expect = 2e-14
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Frame = +1
Query: 196 LSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 354
LS+VE DT E V V F SMGL + +G+ G++ P+ IQ+++I I+ G
Sbjct: 128 LSDVEPDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDG 187
Query: 355 RDVIAQAQSGTGKTATFSISILQTLDTTLRE--TQVLILSPTRELATQIQKVILALGDFM 528
+DV+A A++G+GKTA F I + + L + + L+LSPTRELA Q K LG F
Sbjct: 188 KDVVAMARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFT 247
Query: 529 NVQCHACIGGTNLXXRY 579
++ +GG + ++
Sbjct: 248 GLKMALILGGDRMEDQF 264
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 232 EVIP----TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
EVIP TFD +G++ LL + +G KP+ IQQ I P++ +V+ A++G+GKTA
Sbjct: 23 EVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTA 82
Query: 400 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
F++ I+ L T L+L+PTRELA+QI A G +N++ +GG ++
Sbjct: 83 AFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDV 138
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--- 357
S + ++ D S + + +F+ + L+ ELL+G+Y GF +PS IQ+ + LP++ +
Sbjct: 20 SNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENA-LPLMMAQPAQ 78
Query: 358 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF 525
++IAQ+QSGTGKTA F +++L ++ + Q L ++PT ELA QI +V+ +G F
Sbjct: 79 NLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRF 134
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
FD + L DE+L G+ F + + +Q +I PI++GRDVIA AQ+GTGKTA + + IL
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 427 LDTTLRETQV---LILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
L + V +I++PTRELA QI + + FM V A GGT+
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTD 111
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
LQ L + TQ LIL+PTRELA Q+ + L + NV GG + K++
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQL 122
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/113 (37%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 424 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L + +VL+L PTRELA Q+ + +A G ++++ A GG ++
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSI 114
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/87 (40%), Positives = 59/87 (67%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 427 LDTTLRETQVLILSPTRELATQIQKVI 507
++ + Q+LIL+PTRELA Q+ + +
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAV 100
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 424 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L +++ +L+LSPTRELATQIQ L G + C GG + KEI
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEI 280
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ +F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 418 LQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L+ L + T+V++L+PTRELA Q V L +++ +GG +L + E+
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 589 GLR 597
LR
Sbjct: 395 RLR 397
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 80.6 bits (190), Expect = 3e-14
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Frame = +1
Query: 118 KNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTY 297
K+ ++N ++ SSE + + E+ E TS+ + F SM L LL+ I
Sbjct: 190 KSKKSNKKEEIESSEKFESFP-MDENNEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKK 248
Query: 298 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQVLILSP 471
GF P+ IQ++SI I+ G D++ A++G+GKT F I ++Q L +T + +ILSP
Sbjct: 249 GFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSP 308
Query: 472 TRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
TRELA Q KV+ ++ +GG ++ ++ ++
Sbjct: 309 TRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDL 347
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/96 (40%), Positives = 59/96 (61%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN 531
+D T + Q L+L PTRELA Q+ + G +++
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLS 109
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 80.2 bits (189), Expect = 4e-14
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+S E+LR I G++ + +QQ++I I +G DV+A AQ+GTGKTA F++ ILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 427 L---DTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ T++ + + LIL+PTRELA Q+ I A MN+ GG + + +++
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKL 121
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +1
Query: 241 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 420
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 421 QTLDTTLRETQVLILSPTRELATQI 495
+D Q L+L+PTRELA Q+
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/106 (36%), Positives = 64/106 (60%)
Frame = +1
Query: 271 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 450
+L++ IY YGFE PS +QQ SI +++G+ + AQ+G+GKTA F IS+L ++
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSIC 72
Query: 451 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
Q +I+SPT+EL+ Q +VI LG ++ G ++++I
Sbjct: 73 QAVIISPTKELSNQTLEVINTLGTRSGIRGVCLTSGVMAKEQFEKI 118
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 80.2 bits (189), Expect = 4e-14
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISILQ 423
+ + L +LL+GIY GF +PS IQ ++ I+ ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNV 534
+DT + Q + L PTRELA Q Q V+ LG F +
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTGI 210
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 80.2 bits (189), Expect = 4e-14
Identities = 40/111 (36%), Positives = 75/111 (67%), Gaps = 6/111 (5%)
Frame = +1
Query: 184 LSEDLSNVEFDTSED-VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 360
L+++ ++VE S D +++ TF+SMGL + +LR + GF+ PS +Q +SI ++G+D
Sbjct: 3 LNKNNNSVEDSVSSDLIDLECTFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKD 62
Query: 361 VIAQAQSGTGKTATFSISILQTL-----DTTLRETQVLILSPTRELATQIQ 498
++A+A++G+GKTA +SI I+Q + + ++ + ++L PTREL Q++
Sbjct: 63 ILAKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVK 113
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Frame = +1
Query: 256 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 432
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 433 TTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLXXRYKEI 588
+ QVLIL+PTRE+A QI +V ++G + +++ IGG + K++
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV 112
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/107 (41%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 424 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L T + + L+L+PTRELA QI + A G + ++ HA I G
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HAVIFG 107
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNL 567
LD L Q L+L PTRELA Q+ K + L N++ GG L
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPL 135
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 79.8 bits (188), Expect = 5e-14
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Frame = +1
Query: 223 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 402
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 403 FSISILQTLDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
F + IL + R + L+L+PTRELATQI G F IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGG 167
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 424 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ R + L+LSPTRELATQI + +++ +GG + + + +
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNL 119
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 79.8 bits (188), Expect = 5e-14
Identities = 47/147 (31%), Positives = 74/147 (50%)
Frame = +1
Query: 157 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 336
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 337 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 516
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 517 GDFMNVQCHACIGGTNLXXRYKEIGLR 597
G + ++C +GG +L + +E+ R
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSER 207
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +MGL +L+ I G++ P+ IQ+++I I++GRDV+A A++G+GKT F I + +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 427 L-DTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L ++ + L+L+PTRELA Q K I LG F +++ +GG ++ ++ I
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAI 155
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/109 (39%), Positives = 62/109 (56%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 10 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 69
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
IL L T + L+L+PTRELA QI + ALG + VQ +GG
Sbjct: 70 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGG 118
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/109 (39%), Positives = 62/109 (56%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
IL L T + L+L+PTRELA QI + ALG + VQ +GG
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGG 129
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 79.8 bits (188), Expect = 5e-14
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = +1
Query: 211 FDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTG 390
F+ + + +F M L LL+ I GF++P+ IQ+ I + G+D+ A A +GTG
Sbjct: 208 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTG 267
Query: 391 KTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 561
KTA F++ +L+ L R+ T+VL+L PTREL Q+ V L F N+ +GG
Sbjct: 268 KTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGG- 326
Query: 562 NLXXRYKEIGLRTA 603
L + +E LR A
Sbjct: 327 -LDVKSQEAALRAA 339
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 418 LQTLDTTLRETQVLILSPTRELATQI 495
L LD ++ QVL+L+PTRELA Q+
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQV 128
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 533 FNVMLVLEVPILXXDIRKLDYGQHVVSGTPGRVFDMI 643
F+V+ V + +R+L G HV+ GTPGRV D I
Sbjct: 142 FHVLPVYGGQSMVVQLRQLARGAHVIVGTPGRVMDHI 178
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 79.4 bits (187), Expect = 7e-14
Identities = 41/112 (36%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 424 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L T ++ + LI++PTRELA Q+ + +N++ A GG +
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRI 113
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = +1
Query: 229 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 400 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
F++ IL L R + L+L PTRELA Q+++ + ++ GG +
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQR 245
Query: 580 KEI 588
+++
Sbjct: 246 EDL 248
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGG 558
+D + E Q+L+L+PTRELA Q+ + F N GG
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGG 130
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 79.4 bits (187), Expect = 7e-14
Identities = 46/128 (35%), Positives = 70/128 (54%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
D + V TF +GL L+ + G P+A+Q+R I ++GRDV+ A++G+GK
Sbjct: 68 DDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127
Query: 394 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXX 573
TA F++ IL L L L+PTRELA Q+ + ALG + ++C A IGG +
Sbjct: 128 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187
Query: 574 RYKEIGLR 597
+ K + R
Sbjct: 188 QAKGLARR 195
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 79.0 bits (186), Expect = 9e-14
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+ +G+ LL I G+EKP+ IQ R+I I+ DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 424 ----TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
T D R + L+++PTREL+ QI + + + M + +GG +L + K
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQK 118
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 79.0 bits (186), Expect = 9e-14
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 424 TLDT-----TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L T T R T+ LILSPTRELA QI + I L + + GG ++
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSV 117
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 79.0 bits (186), Expect = 9e-14
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 427 L-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L +VL+L PTREL Q++ G F +V+ GG
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGG 107
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 79.0 bits (186), Expect = 9e-14
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L L+ + FEKP+ IQ R I I+K ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNL 567
+D+ ++E Q ++++PTRELA Q+ L F V IGGT++
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDI 113
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 427 LDTTLRETQVLILSPTRELATQI 495
+ QVL+L+PTRELA Q+
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +1
Query: 223 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 402
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 403 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IGG ++
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESM 334
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/107 (37%), Positives = 64/107 (59%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +G+ +++ GF+ P+ IQ ++I ++ RDVI AQ+G+GKTA F+I ILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L + +L+PTRELA QI + + ALG + V+ +GG ++
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDM 212
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 424 TL--------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
L + LIL+PTRELA Q+ + A ++ GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 580 KEI 588
E+
Sbjct: 132 AEL 134
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 187 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 363
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 364 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNV 534
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 535 QCHACIGGTNLXXRYKEIGLRT 600
+ C GG +L + +E LR+
Sbjct: 249 EVCLCAGGLDL--KAQEAALRS 268
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 163 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 336
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 591 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 650
Query: 337 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 513
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 651 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 710
Query: 514 LGDFM-NVQCHACIGGTNL 567
+G F+ N++ H I G N+
Sbjct: 711 MGKFIDNLKIHYAIKGGNM 729
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 78.2 bits (184), Expect = 2e-13
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 366
SE E + +E +F L + L G+ + KP+AIQ+ SILP ++G+D++
Sbjct: 44 SEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDIL 103
Query: 367 AQAQSGTGKTATFSISILQTLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNV 534
A A++G+GKT F I + + L T L LI++PTRELA QI + + +G +
Sbjct: 104 AAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDF 163
Query: 535 QCHACIGGTNL 567
IGG NL
Sbjct: 164 TTGLIIGGQNL 174
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 442 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 567
+ VL++ TRELA QI K +M NV+ GG ++
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSI 154
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +MGL LLR I GF P+ IQ+++I +++ RDV+ A++G+GKTA F I +++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
L + +I+SP+RELA Q KV+ LG +++ +GG +L ++
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQF 200
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 77.8 bits (183), Expect = 2e-13
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Frame = +1
Query: 133 NXIRKMTSSEVSSNX-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 309
N I+ ++++ N +I+ E+L N+ + +E ++ + +D M + D+LL I +E
Sbjct: 141 NKIKTKPLNQMNENDWRIIRENL-NIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YEN 198
Query: 310 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--------TLDTTLRETQVLIL 465
P+ IQ SI +K RD+IA A++GTGKT + I ++Q T +T+ L+L
Sbjct: 199 PTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVL 258
Query: 466 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+PTRELA QIQK L L ++ CIGG + + +E+
Sbjct: 259 APTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEEL 299
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 424 TLDT--TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
LD+ R+ Q +++ PTRELA Q+ L + + GG N+ + +++
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQL 161
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 424 TLDTTLRETQVLILSPTRELATQI 495
+D + + Q L+L+PTRELA Q+
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQV 139
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEIGLRT 600
+D ++++TQVL+++PTRELA Q+ + + M V GG + K + T
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 601 ACCV 612
A V
Sbjct: 129 AIVV 132
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/107 (32%), Positives = 61/107 (57%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ R + LIL PTRELA Q+ + L ++ A GG ++
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASM 137
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 427 LDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L + + L+++PTRELA QI +V +G + ++ GG
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGG 110
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L T R+ + LIL+PTRELA QI + +L + ++ +GG N + ++I
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDI 119
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/114 (34%), Positives = 65/114 (57%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L+ R Q LI+ PTREL Q+ + I +G +M V+ A GG ++ + ++
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQL 118
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/107 (38%), Positives = 64/107 (59%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ Q LI++PTRELA QI + + + V+ A GG ++
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSM 109
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +MGL LL+ I GF P+ IQ+++I I++ +DV+ A++G+GKTA F I +++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 427 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
L +T + LILSP+RELA Q KV+ LG +++ +GG +L ++
Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQF 205
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 77.4 bits (182), Expect = 3e-13
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Frame = +1
Query: 151 TSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 330
T + K +ED ++F+ + + + TF +M L LL+ + + F P+ IQ
Sbjct: 124 TKEKKVKKEKAKAEDQDLIDFEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAA 183
Query: 331 SILPIVKGRDVIAQAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQK 501
+I + GRD+ A +GTGKTA + + L+ L T+VL+L PTREL Q+ +
Sbjct: 184 TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQ 243
Query: 502 VILALGDFMNVQCHACIGGTNL 567
V L F +V+ +GG ++
Sbjct: 244 VTKQLSQFTSVEVGLSVGGLDV 265
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 77.4 bits (182), Expect = 3e-13
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
E++ F ++L GI T G+ + IQ ++I I++GRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 412 SILQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLXXRYK 582
+LQ L + + + LILSPTR+LA QI + G +++C GG N +Y+
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQ 128
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 427 LDTTLRETQVLILSPTRELATQIQK 501
L+ + Q LIL PTREL Q+ +
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSE 95
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 423
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+D T+ L+++PTRELA QI + + L + A GG ++
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSI 110
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 77.4 bits (182), Expect = 3e-13
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = +1
Query: 217 TSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
T++DV+ F S+GL+ ELL G+ GF++ + +Q+ +I I+ RDV+A+A++GTGK
Sbjct: 12 TTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Query: 394 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM 528
T +F I ILQ ++ Q L+L TRELA Q KV L M
Sbjct: 72 TGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNM 116
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 77.4 bits (182), Expect = 3e-13
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 11/133 (8%)
Frame = +1
Query: 202 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
N++ + S D + I +F++ GLR+ +L I G++KP+ +Q+ ++ I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240
Query: 376 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIQKVILALGDFM 528
Q+G+GKTA F++ I+ TL +T E QV+I+SPTREL QI + I+
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 529 NVQCHACIGGTNL 567
++ GGT++
Sbjct: 301 ILKTVVAYGGTSV 313
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+S+ L + I G++ P+ IQ++++ I+ G DV+A A++G+GKTA F I +L+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + + LILSPTR+LA Q K LG F +++ +GG ++ +++E+
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEEL 145
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/118 (31%), Positives = 68/118 (57%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+S+GL L+ + + +KP+ IQ + PI+ GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLR 597
+ ++L+PTRELA Q+ + L +G + + +GG ++ + +E+ R
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEAR 270
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 424 TLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + L+L+PTRELA Q+ + + G ++ ++ GG + + +++
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/101 (37%), Positives = 67/101 (66%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
D E+V+V+ ++S GL +L GI G+++P+ IQ+ + +KG+D++A+A++G+GK
Sbjct: 3 DVEEEVKVVQ-WNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGK 61
Query: 394 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 516
T + I I+Q + + T+ LI+ PTREL +QI+ V+ L
Sbjct: 62 TGAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVVREL 101
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 77.0 bits (181), Expect = 4e-13
Identities = 42/115 (36%), Positives = 67/115 (58%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ +GL LL+ + +++P IQ SI P+++G++V+ +Q+G+GKTA FS ILQT
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIG 591
L +IL+ RELA QI + I G +N++ IGG + + K +G
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLG 123
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S G E+++ + G+EK + IQQ++I +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 424 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXR 576
L + + + LI +PTRELA QI I A + N+ A GG + +
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQ 117
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/91 (45%), Positives = 57/91 (62%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALG 519
++ Q LIL PTRELA+Q+ I LG
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLG 139
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +1
Query: 241 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 420
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 421 QTLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
Q L + LIL PTRELA Q V LG ++++ GGT+
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTS 129
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 417
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEI 588
+Q DT L+ TQ L+L PTREL Q+ + +G ++ ++ GG ++ + +E+
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEEL 119
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 424 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
+ L+L PTRELA Q+ + I G + + GG
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGG 144
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 420
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN--VQCHACIGGTNL 567
+D Q LILSPTREL QI+K + +++ + A GG +
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKI 113
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 76.2 bits (179), Expect = 6e-13
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Frame = +1
Query: 181 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 360
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 361 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIQKVILALGDFM 528
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q++ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 529 NVQCHACIGGTNLXXRYKEI 588
++ A GG ++ + K +
Sbjct: 124 ALRSDAVFGGVSIRPQVKRL 143
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 76.2 bits (179), Expect = 6e-13
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ + + L+ G+ P+ +Q I I++ +D++ +Q+GTGKT + + I +
Sbjct: 3 TFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPIFE 62
Query: 424 TLDTTLRETQVLILSPTRELATQI--QKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+DT+ RETQ LIL+PT EL QI Q +LA ++V A IG N+ + K I
Sbjct: 63 KIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNI 119
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 76.2 bits (179), Expect = 6e-13
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 424 TLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + L+L+PTRELA Q+ + + G ++ ++ GG + + +++
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 76.2 bits (179), Expect = 6e-13
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +1
Query: 214 DTSEDVEVIPTFDSMGLRDELLRGIY-TYGFEKPSAIQQRSILPIV---KGRDVIAQAQS 381
D S TF+ +GL ELLRG+Y FEKPS IQ + LP++ R++IAQA +
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAET-LPLILMPPHRNLIAQAHN 136
Query: 382 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNV 534
G+GKT F++ +L +D ++ Q L++ PTREL Q V+ +G + +
Sbjct: 137 GSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKYTGI 187
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 76.2 bits (179), Expect = 6e-13
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ TF+ + L LL G+ F P+ IQ +I + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLXXRYKEI 588
+Q+ + + + +I+ PTRELA Q+Q L F + +C A IGGT++ K +
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRM 141
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/107 (35%), Positives = 68/107 (63%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 366
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 367 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/115 (31%), Positives = 65/115 (56%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
++ Q ++++PTRELA Q+ + + +G + GG ++ + + +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRAL 118
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 75.8 bits (178), Expect = 8e-13
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 424 TL----DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L +T++ + LI++PTRELA QI + + G ++ ++ GG N+
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINI 121
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 75.8 bits (178), Expect = 8e-13
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
++ F LR+E+L+ I + GFE PS +Q +I P ++ +DVI QA+SG GKTA F +S
Sbjct: 126 LLTRFSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLS 185
Query: 415 ILQTLD--TTLRETQVLILSPTRELATQIQK 501
+L +D + Q L+L T ELA QI K
Sbjct: 186 LLHMIDPQAAPHKVQALVLCNTHELAMQIYK 216
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 75.8 bits (178), Expect = 8e-13
Identities = 42/131 (32%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEV--IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
++ +L+N + TS DVE + F ++ LR +++RG+ F P+ IQ +I + G
Sbjct: 5 IAHNLANGQNRTS-DVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 358 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNV 534
D++ Q++SGTGKT + ++ LQ + + +VL++ PTRELA Q+ + LG+ +
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 535 QCHACIGGTNL 567
+ + +GGT++
Sbjct: 124 KVSSFMGGTDV 134
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 75.8 bits (178), Expect = 8e-13
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Frame = +1
Query: 193 DLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQ 372
D + E DVE +F+ +GL ++R ++ FE P+ +Q ++I ++GRDV A
Sbjct: 3 DFFDTETPLPNDVE---SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCAS 59
Query: 373 AQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 543
A +G+GKTA F I ++ L +T +T+ +ILSPTRELA Q V+ + F +
Sbjct: 60 AVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTAL 119
Query: 544 ACIGGTN 564
GG++
Sbjct: 120 LLTGGSS 126
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 75.8 bits (178), Expect = 8e-13
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYT-YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTAT 402
E F+ + L ELL+G++ GF +PS IQ ++ I+ +D+IAQA +G+GKT
Sbjct: 97 ESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTC 156
Query: 403 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 549
F + +L +D + TQ + + PTRELA Q + V++ +G F + C AC
Sbjct: 157 FVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITC-AC 204
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 75.8 bits (178), Expect = 8e-13
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F + L +LR + + F KP+ IQ R+I + G+D++A A +G+GKTA F I ++
Sbjct: 334 SFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIE 393
Query: 424 TLDTTLR-------ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
L + +++VLIL+PTRELA Q V ++ F +++ C+GG ++ +
Sbjct: 394 RLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEA 453
Query: 583 EIGLR 597
E+ LR
Sbjct: 454 ELKLR 458
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 75.4 bits (177), Expect = 1e-12
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Frame = +1
Query: 124 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDV-EVIPTFDSMGLRDELLRGIYTYG 300
++ ++K + EV N + + S+ + + E+ E I F + G+R + + ++ G
Sbjct: 62 IKKKKVKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKG 121
Query: 301 FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILS 468
+ IQ ++ PI G DVIAQA++GTGKT +F + ++ Q + R+ +L L+
Sbjct: 122 VKYLFPIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALA 181
Query: 469 PTRELATQIQKVILALGDFMNVQCHACIGGTN 564
PTRELA QI + A+G ++ C GGT+
Sbjct: 182 PTRELAKQISEYFEAIGPHLSTTC--IYGGTS 211
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +1
Query: 226 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 394 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A GG
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGG 120
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ TF+ M L D L + + F P+ +Q+++I P + GRD++A AQ+GTGKT F I
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 418 LQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
L+ L DT QVLIL PTRELA Q+ V L +GGT+
Sbjct: 86 LEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTS 135
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 423
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVI 507
++ L++ Q LIL PTRELA Q+ + I
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEI 91
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 417
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 418 LQTLDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L+ D + + ++L+L+PTREL +QI G ++ + +GGT++
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSV 115
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF S G +LL I G+ P+ IQ++ I+ GRDV+A A++G+GKTA F + +++
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIE 64
Query: 424 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + + ++LSPTRELA Q +V+ L N+ A GG++L +++ +
Sbjct: 65 RLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESL 122
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+SM L + + I T GF P+ IQ+++I I++GRDV+A +++G+GKTA F I ++
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 427 LDTTLR--ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L R + LI+ PTRELA QI V+ F ++ +GG L +++ +
Sbjct: 361 LQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFESL 416
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
++ F+S+ L +L+G+ + G+ KPS IQ +I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 412 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNL 567
I++ L + T+V++L PTRELA Q+ V + F++ + +GG NL
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNL 343
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +MGL LL+ I GF P+ IQ++SI I+ RDV+ A++G+GKTA F I +++
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 427 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRY 579
L + + LI+SP+RELA Q KV+ G +++ +GG +L ++
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/91 (38%), Positives = 56/91 (61%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALG 519
L+ + + Q ++++PTRELA Q+ I LG
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLG 118
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/106 (42%), Positives = 60/106 (56%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF M L LL + KP+ +Q ++I + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 561
TL E + LIL P+RE+A QI KV L L M V IGGT
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGT 138
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 427 L-DTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTN 564
L D +VL+++PTRELATQ+ + + + N + A GGT+
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTD 160
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL- 420
TF+ LL + + GF KP+ IQ +I I+ D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 421 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
+ +++ L+L PTRELA QI + I F+NV A GG
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGG 107
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 442 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEIGLRTAC 606
+ L+L TRELA QI + ++ + + GG N+ +K++ L+ C
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI-HKDL-LKNEC 166
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +MGL LL+ I GF+ P+ IQ++++ I++G DV+ A++G+GKTA F I +++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 427 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L T + + +I+SP+RELA Q KV+ G +++ +GG +L ++ +
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSM 195
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 74.5 bits (175), Expect = 2e-12
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Frame = +1
Query: 202 NVEFDTS-EDVEV-IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
++E TS EDV I +FD LR L I G+ KP+ +Q+ I ++ GRD++A A
Sbjct: 287 SIEVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACA 346
Query: 376 QSGTGKTATFSISILQTL---DTTLR--------ETQVLILSPTRELATQIQKVILALGD 522
Q+G+GKTA F I I+ TL D L E + LI+SPTREL QI
Sbjct: 347 QTGSGKTAAFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSK 406
Query: 523 FMNVQCHACIGGTNLXXRYKEI 588
++CH GGT+ + K+I
Sbjct: 407 DSVLKCHIIYGGTSTSHQMKQI 428
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Frame = +1
Query: 226 DVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF 405
DV I +FD + L + L+G+ G+ KP+ IQ+ +I + G+D++ AQ+G+GKT F
Sbjct: 46 DVSTINSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAF 105
Query: 406 SISILQTLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
I IL+ L T L L+++PTRELA QI + + +G+ IGG +L
Sbjct: 106 LIPILERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDL 163
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 74.5 bits (175), Expect = 2e-12
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF M L LL+ I F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 424 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGL 594
L RE T+VL+L PTREL Q+ V L F V +GG L + +E L
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGG--LDVKTQEAAL 299
Query: 595 RT 600
R+
Sbjct: 300 RS 301
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F ++G+ LL+G+ G +P IQ ++I ++G+D++ AQ+G+GKTA FS+ ILQ
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 427 L----DTTLRET-QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ D +T + LIL+PTRELA QI++ I + ++ +GG + + K I
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRI 207
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF +GL L + GF P+ IQQ++I +++GRDV+A AQ+GTGKTA + + ++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 424 TL------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKE 585
L +T + + LIL+PTRELA Q+ + + GGT++ + ++
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 586 I 588
+
Sbjct: 124 L 124
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 417
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 418 LQTLDTTLRETQVLILSPTRELATQI 495
LQ +D R Q LIL PTREL QI
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQI 87
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ + L +LL I + KP+ IQ +I ++ +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 424 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L R+ +VLIL+PTRELA QI KV+ LG + + GG
Sbjct: 62 FLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGG 109
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 10/115 (8%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S+GL + L+R I G+ +P+ +QQR+I +++GRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 424 TL------DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L D + R+ +VL+L+PTRELA Q+ +N ACI G
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNF-ISACIFG 115
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ Q LIL+P RELA Q+ I + ++ + A G N+
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNI 111
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F + L L + F+ P+ IQ+++ I+ GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 424 TLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + ++LI+ PTREL Q+ + I L ++N++ GG N+ +++++
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDL 125
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/94 (38%), Positives = 60/94 (63%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + L+++LL G+ G+E PS IQ++ I + +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM 528
+ + + +IL PTRELA QI ++ L +M
Sbjct: 77 IYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 74.5 bits (175), Expect = 2e-12
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-D 360
+S + V+ D DV FD L ++R I GF P+ IQ+ +LP KGR D
Sbjct: 1 MSAVVDGVDLDRGCDVSAWFEFD---LHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCD 57
Query: 361 VIAQAQSGTGKTATFSISILQ-TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQ 537
+I AQ+G+GKT F++ ILQ L + + LI++PTRELA Q+ ++ A+ + +
Sbjct: 58 IIGAAQTGSGKTLAFALPILQRLLSQGIDVLRALIVAPTRELALQVCAMMRAVAVYTKID 117
Query: 538 CHACIGGTN------LXXRYKEIGLRTACCVWHTWQS 630
+GG + L R + + T +W T QS
Sbjct: 118 VCPVVGGMSKEKQERLLNRKPAVIVATPGRMWDTMQS 154
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/105 (38%), Positives = 63/105 (60%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF S+G+ L + + Y P+ IQQ+S+ ++GRD A++G+GKT F++ ILQ
Sbjct: 62 TFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQ 121
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L L+L+PTRELA QI++ + A G+ + +Q + IGG
Sbjct: 122 ELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGG 166
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+S GL E+LR + + GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 424 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L +++ VLIL+PTRELATQIQ L G + C GG + KE+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKEL 554
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 442 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 567
+ VL++ TRELA QI K +M +V+ GG ++
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F + L +L+ I G+++P+ IQ +SI I+ + V+A AQ+GTGKTA F + IL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 424 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L E +VLI+SPTRELATQI I ++ + GG
Sbjct: 62 KLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGG 109
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF+ L L + + GF P+ IQ++S I+ GRD++ AQ+GTGKT + + +L+
Sbjct: 3 TFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLK 62
Query: 424 TLDTTLRET-QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
T T ++++L PTREL Q+ + + L +M+V+ GG N+ + K +
Sbjct: 63 LYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNINTQKKAV 118
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
FD++GL +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 427 LDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L + + L+++PTRELA Q+ I F+ ++ A GG N+ + K +
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGV 140
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/117 (33%), Positives = 63/117 (53%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L ++ Q LIL PTREL+ QI+ V L + +C GG L K +
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNL 125
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 74.1 bits (174), Expect = 3e-12
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Frame = +1
Query: 169 SNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP-I 345
+N + + ++ N+ + + + + TF+ + + +E+L I G++KP+ IQ R ILP
Sbjct: 133 NNDDVKNGEVKNLVTNEEREKQNV-TFEDLNICEEILESIKELGWKKPTEIQ-REILPHA 190
Query: 346 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF 525
+D+I +++G+GKTA F I ILQ L + L++SPTREL QI + ALG
Sbjct: 191 FLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALG-- 248
Query: 526 MNVQCHAC--IGGTNL 567
MN+ + C GG ++
Sbjct: 249 MNLLINICTIYGGVDI 264
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFM 528
+D+ Q +IL PTRELA Q+ + + L ++
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYL 99
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/115 (33%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F +GL +L+ I GF++P+ IQ+++I +++G+DV+ A++G+GKTA F + +L+
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 424 TLDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
L + + +ILSP+RELA Q KV+ +++ +GG +L ++K
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFK 217
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +1
Query: 355 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMN 531
+D+I QA+SGTGKT FS+ L+ +D T TQVLIL+PTRE+A QIQ I A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 532 VQCHACIGGT 561
++ H IGGT
Sbjct: 64 LRSHVFIGGT 73
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Frame = +1
Query: 220 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 400 TFSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
F++ IL L R + L+LSPTRELATQI + G M + GG
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVK 177
Query: 565 LXXRYKEI 588
+ K +
Sbjct: 178 YGPQMKAL 185
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/114 (32%), Positives = 65/114 (57%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
++ Q LI++PTRELA QI L + + A GG ++ + +++
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/105 (34%), Positives = 59/105 (56%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F L+D + + GF++PS +Q+ +I +++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 561
+ + L++ PTRELA Q+ + G ++ GGT
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGT 106
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 73.7 bits (173), Expect = 3e-12
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
++ + L +L R + G++ P+ +Q++ I ++ GRD + A +G+GKT F I +L+
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 424 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
+ R+ T LILSPTRELA Q V+ L F N + + IGGT+
Sbjct: 62 RMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTD 111
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 418 LQTLDTTLRETQVLILSPTRELATQI 495
++ R Q ++L P+RELA Q+
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQV 88
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 73.3 bits (172), Expect = 5e-12
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Frame = +1
Query: 223 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 402
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 403 FSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
F++ IL L + T+VL+LSPTREL+ QI A G + + IGG +
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPM 129
Query: 568 XXRYKEI 588
+ + +
Sbjct: 130 GRQVRSL 136
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/119 (29%), Positives = 69/119 (57%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLRT 600
++ + Q L+L+PTRELA Q+++ I +G F ++ A G + + E+ +T
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 424 TLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L R + L+L+PTRELA Q+ L G + ++ + GG + + K +
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 73.3 bits (172), Expect = 5e-12
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F S L +L+GI GF K + +QQ++I +K +D++ A++G+GKTA F + +LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 427 LDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L T T+ LIL PTRELA Q+ K AL F +Q GG
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGG 108
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Frame = +1
Query: 253 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 432
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 433 T----TLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNL 567
T R T+ LIL PTRELA Q+ + I ++ V+ GG ++
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSI 119
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 73.3 bits (172), Expect = 5e-12
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + + E+ +GI GF + + IQ++++ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 427 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
L + + + LIL+PTREL QI+K ALG + A GG +
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVD 113
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 73.3 bits (172), Expect = 5e-12
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = +1
Query: 199 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQA 375
++VEFD S F M L + +LRG+ F PS IQ R+I P+ K G D++ QA
Sbjct: 14 ADVEFDLSLQ------FSKMFLSEPVLRGLTRNNFTHPSPIQARAI-PLAKLGLDLLVQA 66
Query: 376 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 552
+SGTGKT F++ I + + + Q L + PTRE+A QI+ V+ +G N + + I
Sbjct: 67 KSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFI 126
Query: 553 GGTNLXXRYKEI 588
GG ++ K +
Sbjct: 127 GGLDISQDRKNL 138
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 73.3 bits (172), Expect = 5e-12
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Frame = +1
Query: 76 RF*EIFT-YRITCYFKN-LEANXIRKMT----SSEVSSNXKILSEDLSNVEFDTSEDVEV 237
RF ++F Y I + KN ++ + I+K E ++ +E+ N D S ++
Sbjct: 13 RFCKLFRRYYIRKFLKNKIKEDLIKKKRYKYKERENVDGTRLYNEEQINSYSDQSNNI-- 70
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
TF+ +G+ D L++ + P+ IQQ + I++G++VI +++G+GKT + SI
Sbjct: 71 --TFEELGVEDWLIKISKSVHILYPTKIQQLCLPLIIQGKNVIGSSETGSGKTICYCWSI 128
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
LQ L+ + LIL PTREL QI + G + V +CIGG +L + K +
Sbjct: 129 LQELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSCIGGFSLIEQRKSV 185
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/114 (33%), Positives = 65/114 (57%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ + Q LIL+PTRELA Q+ + + VQ GG + + K +
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKAL 116
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/114 (29%), Positives = 68/114 (59%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
+ + Q LIL+PTRELA Q+++ I +G F ++ A G ++ + E+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAEL 117
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/99 (34%), Positives = 62/99 (62%)
Frame = +1
Query: 271 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 450
EL + + G+++P+ IQ+ +I ++G D++ QA +GTGKT F+I I++ L +
Sbjct: 10 ELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDV 69
Query: 451 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ L+L+PTRELA Q+++ I L + + + GGT++
Sbjct: 70 KALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSV 108
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 418 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTN 564
+ + T+ E Q++I +P+RELA QI + L F ++ +GGT+
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTD 111
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
TF + L D++L + F + + IQ R+I ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLXXRYKEI 588
++ R Q +I++PTRELA QI I G N+ IGG ++ + K +
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL 117
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/104 (37%), Positives = 56/104 (53%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F S+G + + + G KP+A+QQ + I+ G + I +Q+GTGKTA F++ I+ T
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L L++SPTRELA QI + G MN IGG
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGG 108
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 72.9 bits (171), Expect = 6e-12
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISIL 420
T+DS+ L LL+ I GFE P+ IQ +I L + + RD+IA+A +G+GKTA ++I I+
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPII 80
Query: 421 QTL--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGL 594
Q + + TQ ++L PTREL+ Q+ + + L F N + IG NL Y + L
Sbjct: 81 QNIMVQGSQLGTQSVVLVPTRELSNQVYQFMEQLIKFSNNK----IGILNLSSNYSDQVL 136
Query: 595 RT 600
++
Sbjct: 137 KS 138
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/117 (30%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F S+G+ L+R + + + P+ IQ +I +++GRD++ AQ+G+GKT F++ IL
Sbjct: 110 SFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILN 169
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLXXRYKEI 588
L + ++L+PTREL Q+ + +A+G+ M ++C +GG ++ + E+
Sbjct: 170 KLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASEL 226
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,779,928
Number of Sequences: 1657284
Number of extensions: 10222179
Number of successful extensions: 32659
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 30307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31987
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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