Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M04
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 8e-36
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 100 9e-22
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 100 9e-22
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 91 9e-19
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 81 1e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 80 2e-15
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 78 5e-15
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 5e-15
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 71 8e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 71 1e-12
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 62 5e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 61 9e-10
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 59 4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 1e-08
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 55 6e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 8e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 52 4e-07
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 46 4e-05
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 36 0.029
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 35 0.066
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.62
SB_34455| Best HMM Match : Herpes_UL3 (HMM E-Value=1.8) 31 1.1
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 29 2.5
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 3.3
SB_20600| Best HMM Match : zf-C3HC4 (HMM E-Value=0.65) 29 4.3
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 28 5.7
SB_37791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_10209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 162 bits (394), Expect = 2e-40
Identities = 76/92 (82%), Positives = 85/92 (92%)
Frame = +1
Query: 292 TYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSP 471
T GFEKPSAIQQR+I PI+KGRDVIAQAQSGTGKTATFSIS+LQ +DT LRE Q L+LSP
Sbjct: 14 TEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSP 73
Query: 472 TRELATQIQKVILALGDFMNVQCHACIGGTNL 567
TRELA QIQKV+LALGD+M+VQCHACIGGTN+
Sbjct: 74 TRELANQIQKVVLALGDYMSVQCHACIGGTNI 105
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMIR 646
DIRKLDYGQH+VSGTPGRVFDMIR
Sbjct: 108 DIRKLDYGQHIVSGTPGRVFDMIR 131
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 147 bits (356), Expect = 8e-36
Identities = 80/140 (57%), Positives = 98/140 (70%), Gaps = 28/140 (20%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP----------------------I 345
EV+ +FD M L++ LLRGIY YGFEKPSAIQQR+I P +
Sbjct: 60 EVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYV 119
Query: 346 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET------QVLILSPTRELATQIQKVI 507
+ RDVIAQAQSGTGKTATF+ISILQ +DT ++ Q L+L+PTRELA QIQKV+
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 508 LALGDFMNVQCHACIGGTNL 567
LALGD+M+V+CHACIGGTN+
Sbjct: 180 LALGDYMHVKCHACIGGTNV 199
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMI 643
D KL+ G HVV GTPGRVFDMI
Sbjct: 202 DRMKLEEGVHVVVGTPGRVFDMI 224
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 100 bits (240), Expect = 9e-22
Identities = 49/107 (45%), Positives = 69/107 (64%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L+ ELL GI+ GF+KPS IQ+ SI + GRD++A+A++GTGKTA + + +L+
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
DTT Q L+L PTRELA Q ++ + LG M Q GGT+L
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSL 155
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 100 bits (240), Expect = 9e-22
Identities = 49/107 (45%), Positives = 69/107 (64%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L+ ELL GI+ GF+KPS IQ+ SI + GRD++A+A++GTGKTA + + +L+
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
DTT Q L+L PTRELA Q ++ + LG M Q GGT+L
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSL 155
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 90.6 bits (215), Expect = 9e-19
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 423
F S+ L LLRG+ GFEKPS IQ ++I P+ + G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAI-PLGRCGLDLIAQAKSGTGKTCVFSVIALE 73
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNL 567
+ T Q++IL+PTRE+A Q++ VI A+G + + C IGG +L
Sbjct: 74 NVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = +1
Query: 439 LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
LRE Q L+LSPTRELA QIQKV+LALGD+M+VQCHACIGGTN+
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNI 43
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVF 634
DIRKLDYGQH+VSGTPGRVF
Sbjct: 46 DIRKLDYGQHIVSGTPGRVF 65
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Frame = +1
Query: 181 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 360
+ ++ + D S + +F+ + L L RG+Y GF KPS IQ+ ++ ++
Sbjct: 83 VTKHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPP 142
Query: 361 V--IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG 519
V IAQ+QSGTGKTA F +++L +D T QV+ LSPT ELA Q KV A+G
Sbjct: 143 VNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMG 197
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 78.2 bits (184), Expect = 5e-15
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ ELLR I GFE PS +Q I + G D+I QA+SG GKTA F ++ LQ L+
Sbjct: 54 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVD 113
Query: 442 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEIGLRTAC 606
+ VL++ TRELA QI K +M N++ GG N+ + + L+T C
Sbjct: 114 GQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINI--KKDQQTLKTNC 167
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 78.2 bits (184), Expect = 5e-15
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ ELLR I GFE PS +Q I + G D+I QA+SG GKTA F ++ LQ L+
Sbjct: 54 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVD 113
Query: 442 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLXXRYKEIGLRTAC 606
+ VL++ TRELA QI K +M N++ GG N+ + + L+T C
Sbjct: 114 GQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINI--KKDQQTLKTNC 167
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 70.9 bits (166), Expect = 8e-13
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
+ F + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 418 LQTL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKE 585
++TL T++ L++SPTRELA Q +V++ +G+ ++ IGG +L K
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKR 168
Query: 586 I 588
I
Sbjct: 169 I 169
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/108 (36%), Positives = 61/108 (56%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F +GL L+ G +KP+ IQ + PI++GRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 424 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L ++L+PTRELA QI LG + ++ +GG ++
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDM 115
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +1
Query: 253 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL- 429
S + ++ L+GI GF + IQ +SI P++KGRD++ A++G+GKT F + +++ L
Sbjct: 576 SEDVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLY 635
Query: 430 ---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
T T V+I+SPTREL+ Q V L N +GG N
Sbjct: 636 KLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVN 683
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
I +F+ + ++L+ I G+ +P+ +Q+ ++ ++ GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 418 L-----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
L Q L+ R L ++PTRELA QI D ++ C GG ++
Sbjct: 538 LTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSV 592
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +1
Query: 337 LPIVK-GRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV--LILSPTRELATQIQKVI 507
LP+V G+DV+A A++G+GKTA F I + + L T + + LILSPTRELA Q QK I
Sbjct: 312 LPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFI 371
Query: 508 LALGDFMNVQCHACIGGTNL 567
LG F ++ +GG ++
Sbjct: 372 KELGRFTGLKSSVILGGDSV 391
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 64.1 bits (149), Expect = 9e-11
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Frame = +1
Query: 145 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 324
+M S + D V + V I +F+ L + L + ++KP+ +Q
Sbjct: 679 EMFRSTIQQGINFEKYDQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQ 738
Query: 325 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL------DTTLRET---QVLILSPTR 477
+ SI ++ GRDV+A AQ+G+GKTA F + ++ ++ ++ ET Q + ++PTR
Sbjct: 739 KYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTR 798
Query: 478 ELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
ELA QI ++ C GG ++ + +++
Sbjct: 799 ELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQL 835
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 20/127 (15%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP-IVKGRDVIAQAQSGTGKTATFSIS 414
+P ++ +G+ ++LR + GF KP+ IQ SI P ++ RD+I A++G+GKT F I
Sbjct: 129 MPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIP 188
Query: 415 ILQTLDTTLR--------------ETQ-----VLILSPTRELATQIQKVILALGDFMNVQ 537
I+Q ++ + E+Q LI++PTRELA Q++ ++ + +V+
Sbjct: 189 IIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVK 248
Query: 538 CHACIGG 558
A +GG
Sbjct: 249 VAAIVGG 255
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +1
Query: 355 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNV 534
+DVI A++G+GKT F++ ILQ L + LIL+PTRELA QI + ALG + V
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 535 QCHACIGGTNL 567
+C +GG ++
Sbjct: 62 KCAVIVGGIDM 72
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 60.9 bits (141), Expect = 9e-10
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Frame = +1
Query: 268 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL---QTLDTT 438
D +L + G++ P+ IQ+++I ++ RD+I A++G+GKTA F+I +L L
Sbjct: 110 DSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKI 169
Query: 439 LRETQ------VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
R+ LIL+PTRELA QI++ IL G + ++ + IGG +
Sbjct: 170 ERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
EV+ +DS+ E R + GF P+ IQ +I + G+DV A A +GTGKTA F +
Sbjct: 8 EVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFML 66
Query: 412 SILQTL---DTTLRETQVLILSPTRELATQ 492
IL+ L T +VL+++PTRELA Q
Sbjct: 67 PILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Frame = +1
Query: 238 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 417
I +F + L EL + F+ P+ IQ +S+ ++ GRD+I A++G+GKT +S+ +
Sbjct: 71 IESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPL 130
Query: 418 LQTLDTTL----RETQV-LILSPTRELATQIQKVILALGDFMNV-QCHACIGGTNLXXRY 579
L T +T V LIL+PTREL +Q+V + + + ++V +C G +N Y
Sbjct: 131 CMLLRTKAPSNPGDTPVALILTPTREL---MQQVFMNVSEMLDVIRCPGNPGPSNQSVIY 187
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 190 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 369
E++ + ++ +D E+ F + G+ +L+ + G KP IQ++++ + + ++
Sbjct: 143 ENIEGDQIESFQDSEISCEFSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLI 202
Query: 370 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQ-IQKVILALGD 522
++++GTGK+ F +L ++ R +I+ PTRELA+Q + +V LGD
Sbjct: 203 KSETGTGKSLVF---LLPSVQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD 251
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+F +GLRD++L+ + +P+ IQ +I I+ VI AQ+G+GKT + ++
Sbjct: 379 SFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVH 438
Query: 424 TLD---------TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
L L+ + I+ P RELATQI K +L + IGG
Sbjct: 439 RLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGG 492
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +1
Query: 244 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF----SI 411
+F G ++++ I + +P+ IQ +++ + GRD+I A++G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 412 SILQTLDTTLRETQ-VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
I+ + + + VLI +PTREL QI G N+ A GG N + K +
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKAL 637
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Frame = +1
Query: 160 EVSSNXKILSEDLSNVEFDTSEDVEVIPT---FDSMGLRDELLRGIYTYGFEKPSAIQQR 330
EVS + ++D S EFD + V F + + + + G IQ
Sbjct: 45 EVSKKKRKTAKDES--EFDEGVEPSVAQREGDFSKFRISQKTIDNLEDRGITYLFPIQAS 102
Query: 331 SILPIVKGRDVIAQAQSGTGKTATFSISILQTL-DTTL-----RETQVLILSPTRELATQ 492
+ I G DVI QA++GTGKT +F++ +++ L D L R +VL+++PTRELA Q
Sbjct: 103 TFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQ 162
Query: 493 IQKVILALGDFMNVQC 540
+ L + V C
Sbjct: 163 VGNEFENLKSNLEVYC 178
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISILQ 423
F+ + L + LL + G++KP+ +Q+ +I PIVKG RD++A AQ+G+GKTA F I IL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 424 TL 429
+
Sbjct: 936 RI 937
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +1
Query: 145 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 324
+M S + D V + V I +F+ L + L + ++KP+ +Q
Sbjct: 102 EMFRSTIQQGINFEKYDQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQ 161
Query: 325 QRSILPIVKGRDVIAQAQSGTGKT 396
+ SI ++ GRDV+A AQ+G+GKT
Sbjct: 162 KYSIPIVIAGRDVMACAQTGSGKT 185
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMI 643
D KL+ G HVV GTPGRVFDMI
Sbjct: 17 DRMKLEEGVHVVVGTPGRVFDMI 39
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 526 MNVQCHACIGGTNL 567
M+V+CHACIGGTN+
Sbjct: 1 MHVKCHACIGGTNV 14
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 454 VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIGLRTACCV 612
VL+L PTRELA Q+Q+V ++G ++ GG + +E+ C+
Sbjct: 135 VLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICI 187
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 393
V + F + L + + +G+ P+ IQ + + ++ GRDV+ A +G+GK
Sbjct: 192 VSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = +1
Query: 124 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 303
+E + KMT E L N+ + + T+ G++ ++L + +
Sbjct: 70 VEVPELAKMTPEETDE----FRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSY 125
Query: 304 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 399
EKP+ IQ ++I I+ GRD+IA + T + A
Sbjct: 126 EKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 442 RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
R+ ++++PTRELA QI + N++C GGT + + E+
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAEL 191
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP-IVKGRDVIAQAQS 381
++ +G+ ++LR + GF KP+ IQ SI P ++ RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 184 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 363
L +L +V+ + + +E PT ++G++ + LR ++ A+ S L + KG+
Sbjct: 172 LERELGDVKTENNPAIEDEPTDLAIGVQIKDLRKVFKGSTGSKVAVDNLS-LNMYKGQIT 230
Query: 364 IAQAQSGTGKTATFSI 411
+G GKT T SI
Sbjct: 231 ALLGHNGAGKTTTMSI 246
>SB_34455| Best HMM Match : Herpes_UL3 (HMM E-Value=1.8)
Length = 328
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 258 GTSR*VIARNIHIWFRKTFSNS--AEKHLAYSQRQRCNSSST---IWYRKDCDILNFNTT 422
GTS+ + + W ++ F NS HL Y N S T RK C+IL+ N
Sbjct: 101 GTSQSLETFRVTFWLQQNFENSPIEHNHLEYEPSGISNCSKTRKRFSRRKTCEILSKNAR 160
Query: 423 DF 428
+F
Sbjct: 161 EF 162
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 365 ITSLPLTIGKMLLC*IAEGFSKPYVYIPRNNSSRSPMESKVGIT 234
+T+LPLTI L + FS+P++++ + +R P E ++ IT
Sbjct: 68 LTTLPLTINSARLQYL--DFSEPFMHVSMDLVTRKPEEKQIDIT 109
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/101 (25%), Positives = 43/101 (42%)
Frame = +1
Query: 250 DSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 429
+S R L +T G K ++ S + + D + + K + Q
Sbjct: 2 ESSSARRNLFTECFTSGSSKDDKDRKHSPVVVELIEDNLPHENESSEKIESLE-EFFQG- 59
Query: 430 DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 552
D+TL+E IL ELA +IQK+I +N++ AC+
Sbjct: 60 DSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 316 AIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 447
+++ +++ V G DV+A + SGT K + F +++ D+ R+
Sbjct: 235 SMEDENVVFGVNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_20600| Best HMM Match : zf-C3HC4 (HMM E-Value=0.65)
Length = 963
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 IXKYCRKICRMLSSTRVKMSKLFPLLTPWDFEMSYCEEYTHMVSKNLQQF-SREAS 337
+ +C++IC L + R+K ++T D CE++ + L Q +RE S
Sbjct: 267 VENFCKEICGQLVAPRLKEPVWLNMMTFQDHRTELCEKFMDQFNTCLSQCNNRETS 322
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 279 ARNIHIWFRKTFSNSAEKH-LAYSQRQRCNSSSTIWYRKDC 398
A NI F K +EK Y +Q+C ++ W+ K+C
Sbjct: 833 ASNITSSFTKLLVEISEKAGFKYGDKQKCQKTNAPWFDKEC 873
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 429
G P+++Q+ +++GRDV A G+GK + + I+ +
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQI 249
>SB_37791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 320 IAEGFSKPYVYIPRNNSSRSPMESKVGITSTSSLVSNSTFDKSSDNIF 177
I+ G P R + R P+ K G TSTSSL+S+S ++ + +F
Sbjct: 162 ISSGLMSPVRRSQRLAAQRMPL--KAGNTSTSSLISSSAKNQHAFRVF 207
>SB_10209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 634 KNSARCARHNMLSVIQFPYIXSQDWYLQYKH 542
+N A H+ +QFP++ +DW Q++H
Sbjct: 219 RNQALDKMHDNNMCMQFPWVEREDWLDQWRH 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,720,782
Number of Sequences: 59808
Number of extensions: 330155
Number of successful extensions: 937
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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