Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M04
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 216 1e-56
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 216 1e-56
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 150 1e-36
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 150 1e-36
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 91 5e-19
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 86 2e-17
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 86 2e-17
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 85 3e-17
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 80 2e-15
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 80 2e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 78 5e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 76 2e-14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 76 2e-14
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 5e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 64 6e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 59 3e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 59 3e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 59 3e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 56 3e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 9e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 53 2e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 53 2e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 53 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 52 5e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 52 5e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 52 5e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 6e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 6e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 49 3e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 49 3e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 9e-05
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.13
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.18
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.23
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.71
AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical ... 31 0.94
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 216 bits (527), Expect = 1e-56
Identities = 101/130 (77%), Positives = 117/130 (90%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
K +D++ VEF++SE+V VIPTFD MGLR++LLRGIY YGFEKPSAIQQR++ I+K R
Sbjct: 5 KAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKAR 64
Query: 358 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQ 537
DVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD+MNVQ
Sbjct: 65 DVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 538 CHACIGGTNL 567
CHACIGGTNL
Sbjct: 125 CHACIGGTNL 134
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +2
Query: 566 LXXDIRKLDYGQHVVSGTPGRVFDMIR 646
L DIRKLDYGQHVVSGTPGRVFDMIR
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFDMIR 160
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 216 bits (527), Expect = 1e-56
Identities = 100/127 (78%), Positives = 117/127 (92%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 366
++D++ VEF++SE+V +IPTFD MGLR++LLRGIY YGFEKPSAIQQR+I I+K RDVI
Sbjct: 8 NDDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVI 67
Query: 367 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 546
AQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD+MNVQCHA
Sbjct: 68 AQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHA 127
Query: 547 CIGGTNL 567
CIGGTNL
Sbjct: 128 CIGGTNL 134
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +2
Query: 566 LXXDIRKLDYGQHVVSGTPGRVFDMIR 646
L DIRKLDYGQHVVSGTPGRVFDMIR
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFDMIR 160
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 150 bits (363), Expect = 1e-36
Identities = 70/112 (62%), Positives = 91/112 (81%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMI 643
D RKL+ G HVV GTPGRV DMI
Sbjct: 140 DQRKLEAGIHVVVGTPGRVGDMI 162
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 150 bits (363), Expect = 1e-36
Identities = 70/112 (62%), Positives = 91/112 (81%)
Frame = +1
Query: 232 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 411
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 412 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 575 DIRKLDYGQHVVSGTPGRVFDMI 643
D RKL+ G HVV GTPGRV DMI
Sbjct: 140 DQRKLEAGIHVVVGTPGRVGDMI 162
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 91.5 bits (217), Expect = 5e-19
Identities = 45/100 (45%), Positives = 66/100 (66%)
Frame = +1
Query: 256 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 435
M L++ELLRGIY +GFEKPSAIQ+ ++ P G+DV Q+Q+G+GKT I ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 436 TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIG 555
QV++L+P R +A + + + +LG +NV C+G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLG 99
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 85.8 bits (203), Expect = 2e-17
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 190 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 369
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 370 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 540
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 541 HACIGGTNLXXRYKEI 588
+GG + ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 85.8 bits (203), Expect = 2e-17
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 190 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 369
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 370 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 540
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 541 HACIGGTNLXXRYKEI 588
+GG + ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 85.4 bits (202), Expect = 3e-17
Identities = 39/107 (36%), Positives = 67/107 (62%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L +LL GI+ G+EKPS IQ+ SI + G+D++A+A++GTGKT + I +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 427 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 567
+ L+ Q +++ PTRELA Q ++ + L + ++ GGT+L
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDL 151
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/147 (31%), Positives = 74/147 (50%)
Frame = +1
Query: 157 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 336
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 337 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 516
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 517 GDFMNVQCHACIGGTNLXXRYKEIGLR 597
G + ++C +GG +L + +E+ R
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSER 207
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/147 (31%), Positives = 74/147 (50%)
Frame = +1
Query: 157 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 336
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 337 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 516
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 517 GDFMNVQCHACIGGTNLXXRYKEIGLR 597
G + ++C +GG +L + +E+ R
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSER 207
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 78.2 bits (184), Expect = 5e-15
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 163 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 336
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 182 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 241
Query: 337 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 513
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 242 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 301
Query: 514 LGDFM-NVQCHACIGGTNL 567
+G F+ N++ H I G N+
Sbjct: 302 MGKFIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 78.2 bits (184), Expect = 5e-15
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 163 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 336
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 207 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 266
Query: 337 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 513
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 267 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 326
Query: 514 LGDFM-NVQCHACIGGTNL 567
+G F+ N++ H I G N+
Sbjct: 327 MGKFIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 78.2 bits (184), Expect = 5e-15
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 163 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 336
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 591 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 650
Query: 337 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 513
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 651 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 710
Query: 514 LGDFM-NVQCHACIGGTNL 567
+G F+ N++ H I G N+
Sbjct: 711 MGKFIDNLKIHYAIKGGNM 729
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 78.2 bits (184), Expect = 5e-15
Identities = 46/130 (35%), Positives = 76/130 (58%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
K+++E+ +E D EDV+ +F +G+ L G+ KPS IQQ ++ ++G+
Sbjct: 27 KVVTEE---IEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGK 82
Query: 358 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQ 537
DVI A++G+GKT F+I +LQ+L + L+L+PTRELA QI + ALG + +
Sbjct: 83 DVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLI 142
Query: 538 CHACIGGTNL 567
+GG ++
Sbjct: 143 AAVIVGGVDM 152
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 78.2 bits (184), Expect = 5e-15
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 187 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 363
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 364 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNV 534
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 535 QCHACIGGTNLXXRYKEIGLRT 600
+ C GG +L + +E LR+
Sbjct: 249 EVCLCAGGLDL--KAQEAALRS 268
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/107 (35%), Positives = 68/107 (63%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 366
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 367 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/107 (35%), Positives = 68/107 (63%)
Frame = +1
Query: 187 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 366
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 367 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 507
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 442 RETQVLILSPTRELATQIQK 501
E V+ + TRELA QI K
Sbjct: 108 GEVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 442 RETQVLILSPTRELATQIQK 501
E V+ + TRELA QI K
Sbjct: 108 GEVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 441
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 106
Query: 442 RETQVLILSPTRELATQIQK 501
E V+ + TRELA QI K
Sbjct: 107 GEVSVVCMCHTRELAFQISK 126
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.3 bits (152), Expect = 4e-11
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = +1
Query: 124 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 303
+E IR+MT +EV K E+L ++ + + I T+ G+ +++ + + +
Sbjct: 269 IETEEIRRMTKAEV----KAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 304 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 468
KP++IQ ++I I+ GRDVI A++G+GKT F + + + + L E +IL+
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILA 384
Query: 469 PTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
PTRELA Q K + ++ GG + + ++
Sbjct: 385 PTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 64.5 bits (150), Expect = 6e-11
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = +1
Query: 274 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQTLDTTLR 444
LL+ + GF + IQ +SI P+++G+DV+A A++G+GKT F +I +L L+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 445 E-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
T V+I+SPTREL+ Q V+ L + N+ +GG+N
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSN 179
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/146 (28%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Frame = +1
Query: 157 SEVSS-NXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 333
SE+S + +I ED N+ + ++ G DE+ + + G+ +P+ IQ+++
Sbjct: 273 SEMSDRDWRIFREDF-NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
Query: 334 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLR-ETQ--------VLILSPTRELA 486
I ++ RDVI A++G+GKTA F + +L + + + E Q +I++PTRELA
Sbjct: 332 IPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Query: 487 TQIQKVILALGDFMNVQCHACIGGTN 564
QI++ G + ++ + IGG +
Sbjct: 392 QQIEEETNKFGKLLGIKTVSVIGGAS 417
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.9 bits (141), Expect = 8e-10
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Frame = +1
Query: 145 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 324
+M S+ K++ E L + D + TF GL + +L+ I G+EK + +Q
Sbjct: 58 RMKKSQAEKRQKLM-ESLVGPQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQ 116
Query: 325 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQV----LILSPTRELA 486
+ I ++ ++++ +A++G+GKT F I ++Q L ++ + V +I++PT+EL
Sbjct: 117 ESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELI 176
Query: 487 TQIQKVILAL 516
TQI K+ + L
Sbjct: 177 TQIYKLFVKL 186
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 426
F+ L L G+ + KP+ IQ+ +I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 427 LDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI-G 591
L LI+SPTRELA Q I A+G C IGG+++ I G
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRISG 197
Query: 592 LRTACC 609
+ C
Sbjct: 198 INIIVC 203
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Frame = +1
Query: 202 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 376 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 510
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 511 ALGDFMNVQCHACIGG 558
N+Q GG
Sbjct: 244 KFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Frame = +1
Query: 202 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 376 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 510
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 511 ALGDFMNVQCHACIGG 558
N+Q GG
Sbjct: 228 KFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Frame = +1
Query: 202 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 376 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 510
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 511 ALGDFMNVQCHACIGG 558
N+Q GG
Sbjct: 225 KFSYKSNIQTAILYGG 240
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 26/132 (19%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 327
++ S LS + FD E++ V I F + L + + I T G+++P+ +Q+
Sbjct: 135 ELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQK 194
Query: 328 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRET-----------QVL 459
SI + GRD+++ AQ+G+GKTA F + ++ + D R L
Sbjct: 195 YSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSAL 254
Query: 460 ILSPTRELATQI 495
+LSPTREL+ QI
Sbjct: 255 VLSPTRELSLQI 266
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 55.2 bits (127), Expect = 4e-08
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL------ 420
L +E+L I GF +P+ IQ + V+ R DV+ A++G+GKT F I ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 421 -----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
+T T +R + LI++PTREL QI K I AL + + +GG
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +1
Query: 295 YG-FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----V 456
YG F+KP+ IQ S + GRD+I+ A++G+GKT F + L + + V
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 457 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
L+L PTRELA Q+Q+V + + ++ GG + + +++
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDL 249
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.0 bits (124), Expect = 9e-08
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +1
Query: 253 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 432
+ G ++ I GFEKPS IQ + ++ G+D I +Q+G+GKT F + L +D
Sbjct: 88 AFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHID 147
Query: 433 TTLRETQ-----------VLILSPTRELATQIQ 498
L + + VL+LSPTRELA QI+
Sbjct: 148 AQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 358 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 495
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 358 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 495
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 178 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 357
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 358 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 495
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 409 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 495
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 409 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 495
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 229 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 408
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 409 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 495
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Frame = +1
Query: 160 EVSSNXKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 312
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 313 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 465
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 466 SPTRELATQI 495
+PTRELA QI
Sbjct: 382 TPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Frame = +1
Query: 160 EVSSNXKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 312
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 313 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 465
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 466 SPTRELATQI 495
+PTRELA QI
Sbjct: 382 TPTRELADQI 391
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Frame = +1
Query: 286 IYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL-----------QTL 429
I+ + F +P+ IQ + V+ R DV+ A++G+GKT F I ++ +T
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 430 DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 558
T +R + LI++PTREL QI K I AL + + +GG
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = +1
Query: 205 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 384
VE +E + ++ + GL +L + + IQ I ++ G DV+ QA++
Sbjct: 369 VEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETS 428
Query: 385 TGKTATFSISILQTLDTTLRETQ----------VLILSPTRELATQIQKVI 507
GKTA F + I+ + ET+ LIL+PTRELA QI + +
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 3e-06
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Frame = +1
Query: 145 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 321
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 322 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 471
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 472 TRELATQIQKVILALGDFMNVQCHACIGG 558
TREL Q L ++C GG
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 3e-06
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Frame = +1
Query: 145 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 321
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 322 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 471
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 472 TRELATQIQKVILALGDFMNVQCHACIGG 558
TREL Q L ++C GG
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Frame = +1
Query: 298 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-----QTLDTTLRETQ--- 453
G P+AIQ + I + GRD+I A +G+GKT TF + ++ Q + ++
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 454 VLILSPTRELATQIQKVILALGDFM------NVQCHACIGGTNLXXRYKEI 588
LI+ P+RELA QI +I+ + D + ++ CIGG + + K++
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = +1
Query: 274 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF----SISILQTLDTTL 441
L+ I +E+P+ IQ +I + GRDV+ A++G+GKTA + + I+ D
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 442 RETQV-LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEI 588
E V +I+ PTRELA Q+ + N+ GG + + E+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = +1
Query: 262 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTT- 438
L ELL ++ ++ + +Q S ++ DV+ ++ +G+GKT F + +++ +
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 439 LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYK 582
L+ + LILSP+REL +QI VI + +N+ GG + K
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Frame = +1
Query: 235 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 414
+I F + LL + +PS IQ +SI + + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 415 IL-------QTLDTTLRETQVL---ILSPTRELATQ 492
++ Q D + + L +L PTRELA Q
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 247 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
F+ G+ EL + + + P+A+Q +I I+ G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 578 IRKLDYGQHVVSGTPGRVFDMI 643
+R L+ G +V GTP RVFD+I
Sbjct: 328 LRTLETGCDIVVGTPSRVFDLI 349
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 298 GFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPT 474
GF+ + IQ + + + + VI A +G+GKTA +++L+ + T E + + ++P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 475 RELATQI 495
++AT++
Sbjct: 1377 EDMATKV 1383
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 313 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 423
+A+QQ SI I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.18
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 1/161 (0%)
Frame = +1
Query: 85 EIFTYRITCYFKNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGL 264
EIF KNLEA K+TSS V N S + ++ TS+ + I + + +
Sbjct: 74 EIFKVLGKQEMKNLEA---LKVTSSWVQ-NATTFS---ATIDSSTSQKLSQIELPEHLTV 126
Query: 265 RDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT-TL 441
+ PS + P ++ RDV A +G+GKT + + +L + +
Sbjct: 127 PSAISTWFPVQYAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPS 186
Query: 442 RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 564
+ Q +IL P + L QI D V + G N
Sbjct: 187 KILQAVILVPVQTLVAQIVDEFKRWNDESGVAKVVSLSGAN 227
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 361 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 540
V Q GTGKT T ++ + + + ++ QV++L+PTRE I+ + M ++
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 541 H 543
H
Sbjct: 142 H 142
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = +1
Query: 319 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT---------LDTTLRETQVLILSP 471
+QQ SI I +GR ++ +A +G GKT F I ++ ++T +LI++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 472 TRELATQI 495
T L Q+
Sbjct: 79 TSALVDQL 86
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 313 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 459
+A+QQ+SI I R ++ A +G GKT F ++ ++ LRE +L
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRERPLL 161
>AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical
protein Y7A5A.11 protein.
Length = 162
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -1
Query: 359 SLPLTIGKMLLC*IAEGF-SKPYVYIPRNNSS---RSPMESKVGITSTSSLVSNSTFD 198
++PLT LC + + S+ ++Y+PR+NSS R ++ +G S ++ TF+
Sbjct: 13 AVPLTYSSSCLCSLRQSIKSESHMYVPRHNSSVLVRGSKDADIGERSDTTSKFTKTFN 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,362,831
Number of Sequences: 27780
Number of extensions: 257493
Number of successful extensions: 825
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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