Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M04
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       77   1e-16
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              30   0.017
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 77.4 bits (182), Expect = 1e-16
 Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 11/133 (8%)
 Frame = +1

Query: 202 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 375
           N++ + S D   + I +F++ GLR+ +L  I   G++KP+ +Q+ ++  I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240

Query: 376 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIQKVILALGDFM 528
           Q+G+GKTA F++ I+ TL          +T  E QV+I+SPTREL  QI + I+      
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300

Query: 529 NVQCHACIGGTNL 567
            ++     GGT++
Sbjct: 301 ILKTVVAYGGTSV 313



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 584 KLDYGQHVVSGTPGRVFDMI 643
           KL  G H++  TPGR+ D +
Sbjct: 319 KLSAGCHILVATPGRLLDFV 338


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -3

Query: 405 ECRSLSCTRLCLSYYISAFDYRQDASLLNC*RFFETICVYSS--Q*LISKSHGVKSGNN 235
           E R L C   CL       D +++ SL     FF+ I  Y +  Q  IS+  G+  G+N
Sbjct: 65  ETRQLKCYMYCLWEQFGLVDDKRELSLNGMLTFFQRIPAYRAEVQKAISECKGIAKGDN 123


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = -1

Query: 320 IAEGFSKPYVYIPRNNSSRSPMESKVGITSTSSLVSNSTFDKSSDNIFXLDDTSDD 153
           I E  S+     P +++++   + +VGI      V N+T     D +  L+   D+
Sbjct: 90  ITEDSSRKQTIDPLSSNTQITRKRRVGIVENQYAVENNTGSSLCDLVQGLERLFDE 145


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 373 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELAT 489
           A+ G G           TLDT LRE Q  +   ++  +T
Sbjct: 55  AEEGEGMAGVTGEEPFDTLDTFLRELQADLAEASQPTST 93


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +1

Query: 451 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLXXRYKEIG 591
           +V ++ P         K+ +  G+F N+QC    G   L  R+   G
Sbjct: 576 EVQVMVPPTIQQFSFTKLPMNAGEFANLQCIVPTGDLPLNIRWSYPG 622


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,005
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)