Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M03
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical pr...   141   4e-34
Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical
           protein B0280.3 protein.
          Length = 251

 Score =  141 bits (341), Expect = 4e-34
 Identities = 69/127 (54%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
 Frame = +3

Query: 270 FVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTSFQAKQLIIKHGLNLGELET 446
           +V + C  GVGSGSTV Y V+ L +  ++  LK + C+PTSF  KQ +I+ GL + +L++
Sbjct: 29  YVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDS 88

Query: 447 NPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYXK 626
           +P +DV IDGADEVD   T IKGGGGCL QEKI+ + +K   VIADY KDS  LGDRY  
Sbjct: 89  HPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDSKHLGDRY-P 147

Query: 627 GVPIEVI 647
            VPIEV+
Sbjct: 148 NVPIEVL 154


>Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical
           protein F16B12.1 protein.
          Length = 655

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 471 DGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIA 581
           +G  EV  N TL K GG CL   K+     K LI+I+
Sbjct: 466 EGNVEVFVNWTLTKSGGSCLSLMKLSVDVDKPLIIIS 502


>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 526 HPPPPLISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIIS 404
           +PPPPL+   F  T + P  +  +FG + ++  LS    I+
Sbjct: 10  YPPPPLVGASFAKT-AIPYSICFVFGTLGNTAVLSYVFFIT 49


>Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical
           protein C30H6.6 protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 462 VTIDGADEVDSNMTLIKGGGGCLLQEKIIASCS 560
           VT+DG D  D N T  +   G + QE ++ +CS
Sbjct: 470 VTVDGVDLRDLNATTWRHAIGTVGQEPVLFTCS 502


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,864
Number of Sequences: 27780
Number of extensions: 238922
Number of successful extensions: 620
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)