Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M03
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.83 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 295 VSVADPLLFMQYKDSLNALNQKN*K*PAYQ 384
           V+V DP+ +  YK  +N   Q     P YQ
Sbjct: 427 VAVHDPVFYQLYKKVMNLYQQYQQSLPVYQ 456


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +2

Query: 209 DVEDVFTTSEASRGVSSCRSICYE*LHFWCR*RIHC-CLC 325
           D+++V   +   RGV+   +       F CR   HC  LC
Sbjct: 708 DLDNVMCRTSGPRGVAIVSASTARSEQFLCRYEAHCFALC 747


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,488
Number of Sequences: 438
Number of extensions: 3031
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)