Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M03
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71100.1 68414.m08205 ribose 5-phosphate isomerase-related si... 102 2e-22
At2g01290.1 68415.m00043 expressed protein 99 1e-21
At3g04790.1 68416.m00516 ribose 5-phosphate isomerase-related si... 95 3e-20
At5g20790.1 68418.m02470 expressed protein predicted protein, Ar... 31 0.87
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 31 0.87
At1g50900.1 68414.m05723 expressed protein 30 1.2
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 29 3.5
At2g41750.1 68415.m05161 DTW domain-containing protein contains ... 28 4.7
At1g26110.1 68414.m03186 expressed protein 28 4.7
At5g66220.1 68418.m08342 chalcone-flavanone isomerase, putative ... 27 8.1
At3g57720.1 68416.m06430 protein kinase, putative contains prote... 27 8.1
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil... 27 8.1
>At1g71100.1 68414.m08205 ribose 5-phosphate isomerase-related
similar to ribose-5-phosphate isomerase GI:18654317 from
[Spinacia oleracea]
Length = 267
Score = 102 bits (244), Expect = 2e-22
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +3
Query: 270 FVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTSFQAKQLIIKHGLNLGELET 446
FV + + G+G+GST +AV R++E + KLK + IPTS + + G+ L +L++
Sbjct: 43 FVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTHEQAVSLGIPLSDLDS 102
Query: 447 NPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYXK 626
+P +D++IDGADEVD + L+KG GG LL+EK+I SKK +VI D +K VK
Sbjct: 103 HPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVIVDESK-LVKYIGGSGL 161
Query: 627 GVPIEVI 647
VP+EV+
Sbjct: 162 AVPVEVV 168
>At2g01290.1 68415.m00043 expressed protein
Length = 265
Score = 99 bits (238), Expect = 1e-21
Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +3
Query: 270 FVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTSFQAKQLIIKHGLNLGELET 446
FV + + G+G+GST +AV R+ E + KL+ + IPTS + ++ + G+ L +L+
Sbjct: 47 FVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDA 106
Query: 447 NPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYXK 626
+P ID++IDGADEVD + L+KG GG LL+EK+I SKK +VI D +K +G
Sbjct: 107 HPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGS-KL 165
Query: 627 GVPIEVI 647
+P+E++
Sbjct: 166 ALPVEIV 172
>At3g04790.1 68416.m00516 ribose 5-phosphate isomerase-related
similar to ribose-5-phosphate isomerase GI:18654317 from
[Spinacia oleracea]
Length = 276
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +3
Query: 288 IFGVGSGSTVVYAVQRLAERVESEKL-KVTCIPTSFQAKQLIIKHGLNLGELETNPNIDV 464
+ G+G+GST +AV ++ + + S +L + IPTS + ++ G+ L L+T+P ID+
Sbjct: 65 VLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDL 124
Query: 465 TIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYXKGVPIEV 644
IDGADEVD N+ L+KG GG LL+EK++ + + K IV+AD TK LG +P+EV
Sbjct: 125 AIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLGGS-GLAMPVEV 183
Query: 645 I 647
+
Sbjct: 184 V 184
>At5g20790.1 68418.m02470 expressed protein predicted protein,
Arabidopsis thaliana
Length = 193
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 384 TSFQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGG 524
T + + LI G+ G+L +DV +DG V+ ++T + GGG
Sbjct: 93 TVTKTEPLICDDGVTKGKLTMCYEVDVDVDGGRCVNGDLTAVSYGGG 139
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 30.7 bits (66), Expect = 0.87
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -3
Query: 514 PLISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDST-RSA 338
PL S S SAP+ +TS+ + SP SP L I FA + S + S S+
Sbjct: 139 PLHSSSPFSFGSAPAAITSVSSGPAQSPASSPRLWIDRFATSSSASATSSSSTSSPFHSS 198
Query: 337 SL---CTA*TTVDPLPTP 293
SL A T+V PTP
Sbjct: 199 SLLGFAPAVTSVSSAPTP 216
>At1g50900.1 68414.m05723 expressed protein
Length = 175
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 490 STSSAPSIVTSIFGFVSSSPRL 425
S S APS+ TS+F SSSPRL
Sbjct: 7 SFSCAPSLATSLFSTTSSSPRL 28
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 306 GSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELETNPNIDVT 467
GST + AVQ L +V ++ VT P A ++ G+ G++ +DVT
Sbjct: 413 GSTRIPAVQELVRKVTGKEPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVT 466
>At2g41750.1 68415.m05161 DTW domain-containing protein contains
Pfam domain, PF03942: DTW domain
Length = 253
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 628 PXLYLSPSFTESFV*SAITISFFEQDAIIFSCNRHPPPPLISVMFEST 485
P +YL PS S A+TIS F+ ++ PPPL ++F++T
Sbjct: 91 PTIYLFPSSPSS---PAVTISEFKSLNLLNHREISNPPPLRLIVFDAT 135
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 523 PPPPLISVMFESTSSAPSIVTSIFGFVSSSPRLSP 419
PPPP S + SS P +S+F F +SS L+P
Sbjct: 217 PPPPTGSSSLQG-SSLPEAPSSLFPFSTSSQMLAP 250
>At5g66220.1 68418.m08342 chalcone-flavanone isomerase, putative /
chalcone isomerase, putative (CHI) similar to SP|P41088
Length = 223
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 GLNLGEL-ETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKD 596
G N EL E+ P + G E + +T+ K G EK++ +C + + YT+
Sbjct: 61 GKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRS 120
Query: 597 SVKLGDRY 620
K D++
Sbjct: 121 EAKAIDQF 128
>At3g57720.1 68416.m06430 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 359
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 193 SSYKVRR*RC--LYNKRSKSRRIKLSINLLRIIAFLVSVADPLLFMQYKD 336
S YKV + R +YN+ S R+ N L++I F + + P+L +Y +
Sbjct: 100 SEYKVTQYRVAEVYNEIVLSARMSNHNNFLKLIGFCLEFSLPVLVFEYAE 149
>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase [Arabidopsis thaliana]
GI:3044214
Length = 664
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 227 TTSEASRGVSSCRSICYE*LHFWC 298
TTS S G+ CR +C + WC
Sbjct: 384 TTSATSDGIEECRKLCGGHGYLWC 407
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,473,010
Number of Sequences: 28952
Number of extensions: 212621
Number of successful extensions: 627
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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