Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M02
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-4|CAB02106.1|  227|Caenorhabditis elegans Hypothetical pr...   264   4e-71
Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z81057-4|CAB02918.1|  559|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>Z79755-4|CAB02106.1|  227|Caenorhabditis elegans Hypothetical
           protein F43G9.5 protein.
          Length = 227

 Score =  264 bits (647), Expect = 4e-71
 Identities = 116/165 (70%), Positives = 136/165 (82%)
 Frame = +3

Query: 159 NRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPH 338
           NR+IN+YPLTNYTFGTK+   EKD SVP RF+RM++E+  +GMRRSVE VL+VHEH LPH
Sbjct: 31  NRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVMGMRRSVEAVLIVHEHSLPH 90

Query: 339 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEXTIGNWWRPNF 518
           +LLLQ+GT F+KLPGGEL  GEDEI G+ RLL ETLGR DG   EW IE  IGNWWRPNF
Sbjct: 91  ILLLQIGTTFYKLPGGELELGEDEISGVTRLLNETLGRTDGETNEWTIEDEIGNWWRPNF 150

Query: 519 EPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPL 653
           +PP+YPYIP H+TKPKEH +L LVQL  ++ F VPKN+KLVAAPL
Sbjct: 151 DPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPL 195


>Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical
           protein Y48E1B.4 protein.
          Length = 611

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 441 TLGRQDGVKQEWLIEXTIGNWWRPNFEPPQ----YPYIPPHITKPKEHKRL 581
           T  R DG K  W+ +  + N+WR    P Q     P IPP +  P +  RL
Sbjct: 38  TTPRPDG-KTRWIPQYNLQNFWRRKIPPLQCGLIEPLIPPRLRSPDDFSRL 87


>Z81057-4|CAB02918.1|  559|Caenorhabditis elegans Hypothetical
           protein F10D11.5 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 66  QFKGLPANKQWPARPGLQHQISQNP--SMNLTLNRSINLYPLTN 191
           Q  G+ +   W     L+H+I   P  S+NLT+NR  N+  LTN
Sbjct: 150 QISGVDSTPIWCIED-LEHEIQSKPARSVNLTVNRVWNIKCLTN 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,011,089
Number of Sequences: 27780
Number of extensions: 319700
Number of successful extensions: 846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)