Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_L22
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 371 e-103
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 371 e-103
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 300 5e-82
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 240 5e-81
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 215 3e-56
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 215 3e-56
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 208 3e-54
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 134 7e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 97 1e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 97 1e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 97 1e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 95 4e-20
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 95 4e-20
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 43 2e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 9e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 38 0.005
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 36 0.019
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.076
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.076
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.076
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.41
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 30 1.2
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.9
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 2.9
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 371 bits (913), Expect = e-103
Identities = 176/196 (89%), Positives = 181/196 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 603
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 604 IGYNPXAVAFVPISGW 651
IGYNP AV FVPISG+
Sbjct: 181 IGYNPKAVPFVPISGF 196
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 371 bits (913), Expect = e-103
Identities = 176/196 (89%), Positives = 181/196 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 603
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 604 IGYNPXAVAFVPISGW 651
IGYNP AV FVPISG+
Sbjct: 181 IGYNPKAVPFVPISGF 196
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 300 bits (737), Expect = 5e-82
Identities = 146/172 (84%), Positives = 152/172 (88%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKK 579
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 240 bits (588), Expect(2) = 5e-81
Identities = 111/117 (94%), Positives = 113/117 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 414
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 79.0 bits (186), Expect(2) = 5e-81
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1
Query: 505 LIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGW 651
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 162
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 215 bits (524), Expect = 3e-56
Identities = 104/194 (53%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 253 KAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 432
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 433 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 609
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 610 YNPXAVAFVPISGW 651
++ FVP+SG+
Sbjct: 345 FSKP--KFVPVSGF 356
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 215 bits (524), Expect = 3e-56
Identities = 104/194 (53%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 253 KAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 432
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 433 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 609
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 610 YNPXAVAFVPISGW 651
++ FVP+SG+
Sbjct: 363 FSKP--KFVPVSGF 374
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 208 bits (507), Expect = 3e-54
Identities = 92/195 (47%), Positives = 136/195 (69%), Gaps = 1/195 (0%)
Frame = +1
Query: 67 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
G K HIN+V +GHVD+GKST G L++ G +DKRT+ K+ +EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 427 EFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 606
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 607 GYNPXA-VAFVPISG 648
G+NP + +VP SG
Sbjct: 284 GFNPKTDITYVPCSG 298
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 134 bits (323), Expect = 7e-32
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAER 264
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 96.7 bits (230), Expect = 1e-20
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 89
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 429
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 430 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 604 IGY 612
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 96.7 bits (230), Expect = 1e-20
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 429
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 430 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 604 IGY 612
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 96.7 bits (230), Expect = 1e-20
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 429
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 430 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 604 IGY 612
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 95.1 bits (226), Expect = 4e-20
Identities = 65/187 (34%), Positives = 95/187 (50%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLK 255
K ++N+ IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 256 AERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 435
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 436 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 615
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 616 PXAVAFV 636
A +
Sbjct: 197 GDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 95.1 bits (226), Expect = 4e-20
Identities = 65/187 (34%), Positives = 95/187 (50%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLK 255
K ++N+ IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 256 AERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 435
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 436 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 615
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 616 PXAVAFV 636
A +
Sbjct: 197 GDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 60.1 bits (139), Expect = 1e-09
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
N ++ HVD GKST L+ CG + Q+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPP---------GQKQ---------MLDKLQVERE 85
Query: 268 RGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 447
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 448 KNGQTREHALLAFTLGVKQLIVXVNKMD 531
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 268 RGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 447
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 448 KNGQTREHALLAFTLGVKQLIVXVNKMD 531
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 268 RGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.7 bits (96), Expect(2) = 2e-05
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 211 GKGSFKYAWVLDKLKAERERGITIDIALWKFETXK-YYVTIIDAPGHRDFIKNMITGTSQ 387
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 388 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMD 531
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 2e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 91 IVVIGHVDSGKST 129
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.0 bits (99), Expect = 9e-05
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIXKF---XKEAQE----MGK 216
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 217 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS 384
+ + L+K E +G T+++ K + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 385 QADCAVLIVAAGTG 426
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAER 264
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 265 ERGITIDIALWKFETXK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 441
R T+D+ + + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 442 ISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 609
I QT EH LLA ++I+ +NK D E + + E K+V +K +G
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIXKF---XKEAQE----MGK 216
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 217 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS 384
+ + L+K E +G T+++ K + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 385 QADCAVLIVAAGTG 426
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 498
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 499 KQLIVXVNKMDSTEPPYSEPRFEEI 573
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 38.3 bits (85), Expect = 0.005
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 11/189 (5%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIXKFXKEAQEMGKGSFK 228
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 229 YAWVL------DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS-- 384
+L + + +D + K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGH 250
Query: 385 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRF 564
D +L++ A G G T+EH LA +L V +V V K+D E
Sbjct: 251 MPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETM 302
Query: 565 EEIKKEVSS 591
+ I + V S
Sbjct: 303 KNITRLVRS 311
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 36.3 bits (80), Expect = 0.019
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKA 258
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 259 ERERGITIDIALWKF----ETXKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 420
RG ++ A E VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 421 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIK 600
+ GI+ TREH L L + + V + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNI-PMFVLITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 601 KIG 609
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.076
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 268 RGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.076
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 268 RGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.076
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 12/202 (5%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIXKFXKEAQEMGKGSFK 228
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 229 YAWVL------DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQ- 387
+L + + +D + K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTIFGMHRP 250
Query: 388 --ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPR 561
+ +L++ A G G T+EH LA +L V +V V K+D P Y
Sbjct: 251 YARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI--- 298
Query: 562 FEEIKKEVSSYIKKIGYNPXAV 627
EE K ++ ++ P V
Sbjct: 299 LEETMKNITRLVRSAKKLPILV 320
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.9 bits (69), Expect = 0.41
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 328 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 507
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 508 IVXVNKMDSTEPPYSEPR 561
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 524 LFTXTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 396
LF T+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 507 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 349
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 348 VSRSINDGNIVLXSFELPESNIDCDTTLTLSL*FVQYPSI 229
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 322 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 417
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,970,668
Number of Sequences: 27780
Number of extensions: 267660
Number of successful extensions: 801
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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