Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L20
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 357 IISKQTRCSSATFCYEECXGNCGN*Y 434
           ++S++ +  +  FC E    NC N Y
Sbjct: 477 LLSQRHQIDAKMFCNESSVSNCENEY 502


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 595 NAWRIHLAFLHTILVGQL*LVHLYFL 518
           N W  HLA  H  + GQL    L F+
Sbjct: 307 NDWEDHLAVKHFSVEGQLEFRALLFV 332


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 499 IFHFHMTESTNAP 537
           +FH+H+T+S + P
Sbjct: 271 VFHWHLTDSQSFP 283


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 542 KLPHQDCVEEGKVYSPRVHPTDLVRL 619
           +L HQ C +   +YSP   P     L
Sbjct: 31  ELFHQKCPKPAPIYSPVSKPVSFESL 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,315
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)