Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L20
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z98866-18|CAB11555.2|  387|Caenorhabditis elegans Hypothetical p...    27   8.8  

>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 105 EMADHSEYYKNQIALARTEIKNLRQQLTSLKHEHQKEIKLIKAALNSLR 251
           E A    Y+K +      E++ L   ++SL  E  KEIKLI      LR
Sbjct: 200 EPASLESYWKTRCLQLEQEMEKLSNNISSLTVEKDKEIKLIVNENRQLR 248


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 132 KNQIALARTEIKNLRQQLTSLKHEHQKEIKLIKAALN 242
           +NQ++    EI+NL++ L  L  +H+ E+K     LN
Sbjct: 568 ENQLSQKDAEIENLKRDLQQLVTKHESELKEQHEQLN 604


>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
           protein C23H4.6 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 105 EMADHSEYYKNQIALARTEIKNLRQQLTSLKHE 203
           E+ D  E    +I  +R ++ NLR+ +  LKHE
Sbjct: 328 ELRDEVEVQDEEIKESRADVDNLRKIVNDLKHE 360


>Z98866-18|CAB11555.2|  387|Caenorhabditis elegans Hypothetical
           protein Y49E10.21 protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = +3

Query: 153 RTEIKNLRQQLTSLKHEHQKEIKLIKAAL 239
           + E+KNL+  + SLK+E++  I++++  L
Sbjct: 59  KNELKNLKNDVESLKNEYKTYIEMVENGL 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,600,821
Number of Sequences: 27780
Number of extensions: 292815
Number of successful extensions: 834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)