Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L19
         (395 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6ESC0 Cluster: ARA1; n=1; unidentified eubacterium SCB...    33   1.5  
UniRef50_Q0DV96 Cluster: Os03g0141800 protein; n=4; Oryza sativa...    33   1.5  
UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p...    33   2.0  
UniRef50_Q02DD8 Cluster: Penicillin-binding protein, transpeptid...    33   2.7  
UniRef50_A3A329 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  
UniRef50_UPI0000EBD4D8 Cluster: PREDICTED: similar to Laminin al...    31   6.1  
UniRef50_UPI00006A07FB Cluster: UPI00006A07FB related cluster; n...    31   8.1  
UniRef50_Q2JWY6 Cluster: Putative gamma-glutamyl phosphate reduc...    31   8.1  
UniRef50_Q8GGK1 Cluster: Transcription antiterminator protein; n...    31   8.1  

>UniRef50_A6ESC0 Cluster: ARA1; n=1; unidentified eubacterium
           SCB49|Rep: ARA1 - unidentified eubacterium SCB49
          Length = 280

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 49  VAPELNQCHFVPGRIQSHCVS-RGSASXRPPSWSPLGRG 162
           + P +NQ  + PG +Q  CV      + +   WSPLGRG
Sbjct: 161 IKPTVNQIEYHPGYMQQDCVQFCNDNNIQVEGWSPLGRG 199


>UniRef50_Q0DV96 Cluster: Os03g0141800 protein; n=4; Oryza
           sativa|Rep: Os03g0141800 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 811

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 173 SWQQPRPSGDQDGGRXDADPRETQWDCIRPGTKWHWFSSGATPH 42
           SW     +  + GGR D  P +   D +     W    SGA PH
Sbjct: 710 SWSSASTASGESGGRADVYPFQNGMDTVSHAMNWSLRLSGAVPH 753


>UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p -
           Drosophila melanogaster (Fruit fly)
          Length = 1071

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 31  VTCLCGVAPELNQCHFVPGRIQSHCVSRGSASXR 132
           + C CG+   L QC  +P  + +HC   G+ S R
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSYR 686


>UniRef50_Q02DD8 Cluster: Penicillin-binding protein,
           transpeptidase; n=1; Solibacter usitatus Ellin6076|Rep:
           Penicillin-binding protein, transpeptidase - Solibacter
           usitatus (strain Ellin6076)
          Length = 1029

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 45  WCSSGTKPVPFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPATK 179
           W  +GT PV   A      +RFAW  + +++++VA G W +   K
Sbjct: 7   WTGAGTAPVMVRAPRSGATVRFAW--LVASSLVVATGLWFVYQAK 49


>UniRef50_A3A329 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 308

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 45  WCSSGTKPVPFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPAT 176
           W  +G   +PFC R++ VP    W  + SAA     GAW L +T
Sbjct: 166 WSKAGDWALPFCGRAEYVPEHGLWFGL-SAANDDVFGAWDLSST 208


>UniRef50_UPI0000EBD4D8 Cluster: PREDICTED: similar to Laminin alpha-5
            chain; n=6; Eutheria|Rep: PREDICTED: similar to Laminin
            alpha-5 chain - Bos taurus
          Length = 3427

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = +1

Query: 37   CLCGVAPELNQCHFVPGRIQSHC-VSRGSASXR---PPSWSPLGRGC--CQLQNG 183
            C CG A E ++CH  P   Q HC    G    R   P  W    +GC  CQ Q G
Sbjct: 1797 CACGPAAESSECH--PQSGQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGG 1849


>UniRef50_UPI00006A07FB Cluster: UPI00006A07FB related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A07FB UniRef100 entry -
           Xenopus tropicalis
          Length = 177

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +3

Query: 114 WVCIXSAA-ILVAAGAWL-LPATKWVCXTVSCTYLFSFK*L*ILFQFVY-YCIMVKLEFQ 284
           WVC+     + ++   W+ L    WVC ++ C    S +    ++ ++Y Y + V +   
Sbjct: 57  WVCLSLQCWVCLSLQCWVCLSLQCWVCLSLQCWVCLSLQCWXYIYIYIYIYIMCVYIYIY 116

Query: 285 LYSY*IKIVTYVLI 326
           +Y Y I I  Y+ I
Sbjct: 117 IYIY-IYIYIYIYI 129


>UniRef50_Q2JWY6 Cluster: Putative gamma-glutamyl phosphate
           reductase; n=2; Synechococcus|Rep: Putative
           gamma-glutamyl phosphate reductase - Synechococcus sp.
           (strain JA-3-3Ab) (Cyanobacteria bacteriumYellowstone
           A-Prime)
          Length = 433

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 61  LNQCHFVPGRIQSHCVSRGSASXRPPSWSPLGRGCCQLQNGFVXRYHVPIYLV 219
           LN     P R+Q         + +P     L RGC Q    F+ RY VP+ L+
Sbjct: 71  LNGLKLTPERLQRSAQLLALLAQQPDPIGSLERGCRQDNGLFIGRYRVPLGLI 123


>UniRef50_Q8GGK1 Cluster: Transcription antiterminator protein; n=4;
           Corynebacterium glutamicum|Rep: Transcription
           antiterminator protein - Corynebacterium glutamicum
           (Brevibacterium flavum)
          Length = 289

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 151 AATKMA-ADXMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPXETRMTDXI 2
           +AT +A AD +Q   KRNG   +L      L  E+HH    P ETR+   I
Sbjct: 90  SATVVALADHLQMAVKRNGLEPELTSKPNPLSAEVHH--LYPEETRLATEI 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,910,954
Number of Sequences: 1657284
Number of extensions: 6246792
Number of successful extensions: 17188
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17182
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)