Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L19
         (395 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0341 + 2444419-2445495                                           32   0.19 
02_01_0345 + 2484073-2485152                                           30   0.59 
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428...    29   1.4  
02_03_0050 + 14433013-14433303                                         27   5.5  
07_03_0233 - 15548622-15548651,15548811-15548916,15549574-155497...    27   7.2  
03_02_0343 - 7649210-7650154                                           27   7.2  
04_03_0119 + 11485753-11486202                                         26   9.6  

>02_01_0341 + 2444419-2445495
          Length = 358

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 45  WCSSGTKPVPFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPAT 176
           W  +G   +PFC R++ VP    W  + SAA     GAW L +T
Sbjct: 216 WSKAGDWALPFCGRAEYVPEHGLWFGL-SAANDDVFGAWDLSST 258


>02_01_0345 + 2484073-2485152
          Length = 359

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 45  WCSSGTKPVPFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPAT 176
           W   G   +PFC R++ VP    W+ + S A     GAW L +T
Sbjct: 214 WSKVGDWALPFCGRAEFVPEHGLWLGL-SVADDGVLGAWDLSST 256


>04_04_0481 -
           25541355-25541849,25541933-25542535,25542730-25542837,
           25542925-25543260,25543391-25543461,25543692-25543824
          Length = 581

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 21  VSXGDVFVWCSSGTKPVPFCARSDTVPLRFAWVCIXSAAI 140
           V+ G   V  S G   VP+   S+  PLRF  VC   AA+
Sbjct: 456 VALGAYIVSYSPGMGTVPWIVNSEIYPLRFRGVCGGIAAV 495


>02_03_0050 + 14433013-14433303
          Length = 96

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 145 SPLGRGCCQLQNGFVXRYHVPIYLVLSNCKF 237
           S LGR   Q Q G V R H P+Y+  S C++
Sbjct: 19  SSLGRR--QQQQGAVPRGHFPVYVGESRCRY 47


>07_03_0233 -
           15548622-15548651,15548811-15548916,15549574-15549725,
           15550208-15550252,15550663-15550866
          Length = 178

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +3

Query: 102 LRFAWVCIXSAAILVAAGAWLLPATKWVCXTVSCTYLFSFK*L*ILFQFVYY 257
           L FAW+ + S +      AW +         +   Y FS K L I + F ++
Sbjct: 40  LFFAWLLVLSVSACSPGIAWTVVNLAHFAVELKSNYAFSLKQLAITYHFFHW 91


>03_02_0343 - 7649210-7650154
          Length = 314

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +1

Query: 88  RIQSHCVSRGS---ASXRPPSWSPLGRGCCQLQNGFVXRYHV 204
           R   HC   GS   AS  PP   P+G G   L  GF    HV
Sbjct: 174 RAAQHCGMPGSPGLASAFPPFAQPIGHGSSDLPFGFGNGDHV 215


>04_03_0119 + 11485753-11486202
          Length = 149

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/60 (26%), Positives = 21/60 (35%)
 Frame = +3

Query: 24  SXGDVFVWCSSGTKPVPFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPATKWVCXTVSC 203
           S G ++ WCSS   P P  A S    L     C      +      L P     C  ++C
Sbjct: 67  SRGGMYPWCSSPASPPPSSATSTCTALSPGTSCCRRCRRVSPLSCMLWPEID--CDDIAC 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,103,398
Number of Sequences: 37544
Number of extensions: 176628
Number of successful extensions: 518
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)