Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L19
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    29   0.91 
U40800-5|AAO91743.1|  936|Caenorhabditis elegans Hypothetical pr...    29   0.91 
U11279-3|AAF99909.1|  423|Caenorhabditis elegans T box family pr...    28   2.8  
AF067940-6|AAC19205.1|  223|Caenorhabditis elegans Hypothetical ...    27   6.4  
AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical...    26   8.5  
AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical...    26   8.5  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    26   8.5  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    26   8.5  

>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 136 PSWSPLGRGCCQLQNGFVXRYHVPIYLVLSNC 231
           P +SP G G C  QN ++   H+  +L    C
Sbjct: 429 PHYSPKGNGICSRQNRWIFHQHLRFHLDFVRC 460


>U40800-5|AAO91743.1|  936|Caenorhabditis elegans Hypothetical
           protein D2096.3 protein.
          Length = 936

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 70  CHFVPGRIQSHCVSRGSASXRPPSWSPLGRGCC 168
           C+  PG  Q  C SRG      PS SP+G   C
Sbjct: 33  CYPEPGASQDACQSRGCIWTEAPSSSPVGTPWC 65


>U11279-3|AAF99909.1|  423|Caenorhabditis elegans T box family
           protein 2 protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 86  PGTKWHWFSSGATPHKHVTTRNTDD 12
           P T  HW S GA  HK   T N  D
Sbjct: 149 PSTGEHWMSKGANFHKLKLTNNISD 173


>AF067940-6|AAC19205.1|  223|Caenorhabditis elegans Hypothetical
           protein F36F12.6 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 176 CSWQQPRPSGDQ 141
           C+WQ PRPS D+
Sbjct: 199 CTWQDPRPSSDK 210


>AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8b protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 173 SWQQPRPSGDQDGGRXDADPRETQWDCIRPGTKWHW 66
           +++ P PS  Q G +     R T+    R GTKW W
Sbjct: 216 NYKPPPPSLGQFGSQMGTWFRNTEMFAGRFGTKWSW 251


>AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8a protein.
          Length = 478

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 173 SWQQPRPSGDQDGGRXDADPRETQWDCIRPGTKWHW 66
           +++ P PS  Q G +     R T+    R GTKW W
Sbjct: 255 NYKPPPPSLGQFGSQMGTWFRNTEMFAGRFGTKWSW 290


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 172 LQNGFVXRYHVPIYLVLSNCKFCFNLSII 258
           L  G+V RY  PI+L+   C F F L ++
Sbjct: 75  LYEGYVSRYLAPIFLI-DFCAFYFTLILL 102


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 199 DTVXQTHFVAGSNHAPAATKMAADXMQTHAKRNGTVSDLAQNGT 68
           D++  T+F   SNH P+ T +    + +H   +G + +   N T
Sbjct: 298 DSLNNTYFNNTSNHTPSNTFLNHSTVDSHNNSSGQLHNSINNYT 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,895,815
Number of Sequences: 27780
Number of extensions: 148789
Number of successful extensions: 368
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)