Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L19
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 205  VHDTVXQTHFVAGSNHA 155
            V+    +TH VAGSN A
Sbjct: 1567 VYQLKVETHNVAGSNQA 1583


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 205  VHDTVXQTHFVAGSNHA 155
            V+    +TH VAGSN A
Sbjct: 1563 VYQLKVETHNVAGSNQA 1579


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 109 SRGSASXRPPSWSPLGRGCCQLQNG 183
           ++G A  + PS+ P     C  +NG
Sbjct: 876 AQGRAILKIPSYKPASTPGCSSKNG 900


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,363
Number of Sequences: 438
Number of extensions: 1931
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)