Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L18
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QZ92 Cluster: GLP_567_56175_54097; n=1; Giardia lambl...    34   3.4  
UniRef50_Q4Z5B7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  

>UniRef50_Q7QZ92 Cluster: GLP_567_56175_54097; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_567_56175_54097 - Giardia lamblia
           ATCC 50803
          Length = 692

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +3

Query: 162 GLKNVFLFSLXNNYYV*KLIKQNLXRYL 245
           GLK+V++FS+ NNY +   +K N  R+L
Sbjct: 588 GLKSVYMFSIKNNYVIDATLKGNFARFL 615


>UniRef50_Q4Z5B7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 263

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = -3

Query: 541 YSFYVLTCGFLSSKFNVLVPLGEFSK*QIINVIQHSVSE*QLRYSKRALKKTLYICL-KL 365
           Y + +L  GF++S+ +  V + E  K +I  +    V+  + +    AL  TL  CL  +
Sbjct: 6   YIYQILNLGFITSEKDENVEITEKGK-EIKRIYNEIVNLYKQKCENEAL--TLEECLLNI 62

Query: 364 VWNK-IIQKLYFIFKCLKIIPKNHSPRCY 281
             NK +I+ L++I K  KII   ++ +CY
Sbjct: 63  QSNKTLIELLFYILKNHKIINNKYTQQCY 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,443,840
Number of Sequences: 1657284
Number of extensions: 10229469
Number of successful extensions: 22790
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22787
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)