Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L18
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0443 - 25253425-25253679,25254072-25254131,25254259-252543...    29   4.3  
11_04_0426 - 17573681-17574010,17574163-17574282,17574382-175747...    28   7.5  
12_02_0309 - 17342900-17342904,17343860-17343887,17344003-173441...    27   9.9  
03_01_0324 - 2525712-2525897,2526181-2526288,2526330-2526421,252...    27   9.9  

>04_04_0443 -
           25253425-25253679,25254072-25254131,25254259-25254365,
           25256594-25256667,25256865-25256998,25257233-25257304,
           25257453-25257522,25257602-25257675,25258403-25258574,
           25258910-25258934,25259358-25259517,25259730-25259788,
           25259908-25260079
          Length = 477

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -3

Query: 652 IXQIVLWVFYQLRDKTHTLHIVLQSYRTVLWILFVIAYSFYVL 524
           + +I  WV +     T  LH V  S+ +  WIL  + Y+  ++
Sbjct: 75  VLRIFFWVMFATTFGTRKLHEVRNSWHSGCWILKFLVYAVSII 117


>11_04_0426 -
           17573681-17574010,17574163-17574282,17574382-17574754,
           17575051-17575087,17575821-17575872
          Length = 303

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -3

Query: 640 VLWVFYQLRDKTHTLHIVLQSYRTVLWILFVIAYSFYV-LTCGFLSSKFNVLVPLGEF 470
           +LW++Y L      L I + S   V+  +++  Y  Y        ++K  +LV +G F
Sbjct: 58  MLWIYYALLKSDECLLITINSAGCVIETIYIAVYLVYAPKKAKMFTAKLLLLVNVGVF 115


>12_02_0309 -
           17342900-17342904,17343860-17343887,17344003-17344122,
           17344252-17344413,17344655-17344865,17344980-17345016,
           17345965-17346016
          Length = 204

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 640 VLWVFYQLRDKTHTLHIVLQSYRTVLWILFVIAYSFYV-LTCGFLSSKFNVLVPLGEF 470
           +LW+FY L      L I + +   V+  ++++ Y  Y        ++K  +L+ +G F
Sbjct: 58  MLWIFYALIKSNEALLITINAAGCVIETIYIVMYLAYAPKKAKVFTTKILLLLNVGVF 115


>03_01_0324 -
           2525712-2525897,2526181-2526288,2526330-2526421,
           2527861-2528038
          Length = 187

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 373 LKLVWNKIIQKLYFIFKCLKIIPKNHSPR 287
           +KL WN  ++K  F+F  L + P +H+ R
Sbjct: 105 VKLAWNAKMKKEQFLFMMLVLEPLHHAAR 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,619,468
Number of Sequences: 37544
Number of extensions: 227421
Number of successful extensions: 441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)