Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L17
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065458-1|BAC05718.1|  316|Homo sapiens seven transmembrane hel...    31   3.4  
AF399506-1|AAK94991.1|  216|Homo sapiens olfactory receptor prot...    31   4.6  
AB065457-1|BAC05717.1|  316|Homo sapiens seven transmembrane hel...    30   6.0  

>AB065458-1|BAC05718.1|  316|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -1

Query: 352 VRPIRLLSCFHLPVGVSVILFSFSEFSMKFTLDT*AAAYIRSVNTSYSMXSNSSDVKSFF 173
           + P+  LSC   P    ++LF FS     FT+ +   +Y+  + T + M S     K+F 
Sbjct: 181 ILPLYRLSCVD-PYINELVLFIFSGSVQVFTIGSVLISYLYILLTIFKMKSKEGRAKAFS 239

Query: 172 SCS 164
           +C+
Sbjct: 240 TCA 242


>AF399506-1|AAK94991.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 346 PIRLLSCFHLPVGVSVILFSFSEFSMKFTLDT*AAAYIRSVNTSYSMXSNSSDVKSFFSC 167
           P+  L+C      + V+ FS + F++ FTL     +YI  + T   + S S   K+F +C
Sbjct: 116 PLLQLACSDTKF-LEVMGFSCAAFTLMFTLALIFLSYIYIIRTILRIPSTSQRTKAFSTC 174

Query: 166 S 164
           S
Sbjct: 175 S 175


>AB065457-1|BAC05717.1|  316|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -1

Query: 346 PIRLLSCFHLPVGVSVILFSFSEFSMKFTLDT*AAAYIRSVNTSYSMXSNSSDVKSFFSC 167
           P+  LSC   P    ++LF FS     FT+ +   +Y+  + T + M S     K+F +C
Sbjct: 183 PLYRLSCVD-PFINELVLFIFSGSVQVFTIGSVLISYLYILLTIFRMKSKEGRAKAFSTC 241

Query: 166 S 164
           +
Sbjct: 242 A 242


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,079,579
Number of Sequences: 237096
Number of extensions: 1376576
Number of successful extensions: 5919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5919
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)