Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_L12
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 33 0.27
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.47
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 31 0.62
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 31 1.1
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.1
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_53006| Best HMM Match : PH (HMM E-Value=1.8e-10) 29 4.3
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 28 5.7
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 28 5.7
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 28 5.7
SB_35840| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.38) 28 7.6
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 162 ACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCPGSDGIRLS 341
+C DCT PICA +++ NEC+M CE+ L S CP D + L+
Sbjct: 2153 SCPDDCTNET-KPICASDG----QTYDNECLMQKRACENNQNLNVTSDRACPCKDPVDLA 2207
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 162 ACMHDCTKANL-DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCP 317
+C C +L PIC G K++ NEC + +C++ ++ + +CP
Sbjct: 288 SCPSSCGDESLPQPIC----GSNNKTYANECELRMDSCKNNKSIAIQFRKECP 336
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 165 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
C+ C N DP+C G K++GNEC++ C T+ +C
Sbjct: 24 CVRPCPAIN-DPVC----GTDGKTYGNECMLGAATCHSNGTITLAYPGEC 68
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +3
Query: 135 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
V D C C K L P+C G K++ NEC+M +C+ + S C
Sbjct: 1058 VSVDGTPTCVCPRRCPK-KLMPVC----GSDGKTYNNECLMRAASCKANKNITVSSYFPC 1112
Query: 315 P 317
P
Sbjct: 1113 P 1113
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 186 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCP 317
A+ P+CA K++ N M N CE LR +SQ +CP
Sbjct: 1529 ADYTPVCASDG----KTYPNRMSMENAGCEKNMILRIVSQGECP 1568
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 168 MHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCP 317
M C+ AN +C G ++ NEC + C+ L +SQ CP
Sbjct: 1442 MFKCS-ANRSDVC----GSDRMTYSNECTLTQTACQESKNLTVVSQGPCP 1486
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 198 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
P+CA K + N M N CE LR +SQ QC
Sbjct: 1979 PVCASDG----KIYPNRMTMENAGCEKNMVLRAVSQDQC 2013
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 165 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
C CTK P+C G K++GN+CV+ CE + ++ + +C
Sbjct: 39 CNRACTKI-YRPVC----GTDGKTYGNKCVLEIATCESEGAVQLAHEGEC 83
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 192 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCPG 320
LDP+C G K++ NEC + C+ + + + CPG
Sbjct: 5797 LDPVC----GSDGKNYDNECNLRQNACKTNTLITVVRRDACPG 5835
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 174 DCTKANLDPIC----------AGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
+CT N P+C A G +S+ NEC++ +C+ + + +Q C
Sbjct: 5212 ECTAINGSPVCTCNSICTLEYAPVCGTDGQSYDNECLLQTASCQRNELIEVATQGTC 5268
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +3
Query: 165 CM-HDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
CM C N P+C G K++ NEC + Y C+ + S C
Sbjct: 5619 CMCQSCPSIN-KPVC----GSDGKTYNNECELRQYACKSDSLITVASLSSC 5664
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 156 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
K +C C + P+C G KS+G+EC + CE K L +S+ +C
Sbjct: 1679 KCSCPIYCPPSG-QPVC----GSDGKSYGSECELRKEACEAKIKLTLVSKGKC 1726
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 195 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCPG 320
DP+C G K + NEC++N C LR +++ C G
Sbjct: 822 DPVC----GTDNKEYANECLLNVAACAANIHLRVLNKGPCGG 859
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 165 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
C +C + P+C G K++ NEC + CE K + SQ +C
Sbjct: 3970 CNKNCPSTS-KPVC----GSDGKTYKNECELKRAACESKKNVTVASQGEC 4014
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Frame = +3
Query: 186 ANLDPICAGKTGE---KPKSF----GNECVMNNYNCEHKDTLR---KISQXQCP 317
AN +P+C TGE P + GNEC+ NCE +L ++S QCP
Sbjct: 2012 ANFNPVCNKTTGECYCNPYHYRSPKGNECL--KCNCEEIGSLSLQCRVSDGQCP 2063
>SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 123 DLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYN 269
D ++AD +R+ C +D +N C G KP + C YN
Sbjct: 144 DFNIIRADRQRRSLCDNDFYDSNFYICCDGYISWKPSNDAQCCRHRAYN 192
>SB_53006| Best HMM Match : PH (HMM E-Value=1.8e-10)
Length = 181
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -2
Query: 404 ESNAVSTYYKQRD*LLFXQCSRETD---AI*SRTLALADLAQRIFVFAIVVVHDTLVSE* 234
E YY+ ++ + QC+ + +R L + + ++ FA+ + D L+++
Sbjct: 35 EGQVTWAYYRNKEDISSNQCAGHVELDSTYIARNLEVGEKKKKPHCFALGPLFDNLMAKR 94
Query: 233 LGFLSCLSSADRV 195
++SC S AD++
Sbjct: 95 TYYISCESEADKL 107
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 192 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQCP 317
LDP+C G K++ N C + C+ + IS+ CP
Sbjct: 281 LDPVC----GSDGKNYDNVCKLRQNACKTNTLITLISRDACP 318
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 180 CSHACRPSCAQHQPSPASGPACRDGTTPPRTTQRKHKKIMVFIV 49
C+ AC P+C PS AC G +P K K+M F V
Sbjct: 288 CTTACSPTCCFQTPSYTPYSACY-GASPCAPPTPKPPKMMKFSV 330
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +1
Query: 43 RSNYEDHYFL--VLSLCCSWRCRAV 111
R+ EDHYFL VL+L SW R V
Sbjct: 326 RAEPEDHYFLLAVLALAASWTSRQV 350
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 165 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQXQC 314
C C K P+C G K++GN+C++ CE + ++ + +C
Sbjct: 39 CNRACKKI-YSPMC----GTDGKTYGNKCMLEIATCESEGAVKLAHEGEC 83
>SB_35840| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.38)
Length = 449
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 296 LAQRIFVFAIVVVHDTLVSE*LGFLSCLSSADRVKISFGA 177
LA IFV + VH TL +E + L C A R + A
Sbjct: 3 LAFAIFVLLLGAVHSTLATELIFMLMCFRCASRHAYEYSA 42
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,397
Number of Sequences: 59808
Number of extensions: 360553
Number of successful extensions: 959
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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