Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L08
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0470 - 18151326-18151769                                         31   0.80 
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639...    29   3.2  
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706...    27   9.9  
03_02_0188 + 6251256-6251561                                           27   9.9  

>10_08_0470 - 18151326-18151769
          Length = 147

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +2

Query: 269 KITVKQLQGGECLIXIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQMYPN 448
           +I VK L G    + + PS  +  +K  +  K  +P +QQ          D HT+ +Y  
Sbjct: 7   QIFVKGLTGKTTALRMEPSDTVESVKVKLVDKEGLPPDQQPLIFQGHQLDDGHTL-IYYG 65

Query: 449 IKEXTKLNLV 478
           I+E + L+L+
Sbjct: 66  IQEESTLHLL 75


>08_02_0067 -
           11863092-11863104,11863432-11863547,11863610-11863950,
           11864978-11865331,11866055-11866150,11866812-11866980,
           11867541-11867618,11867745-11867926,11868010-11868094,
           11868545-11868648,11869510-11869590,11870123-11870240,
           11871299-11871430,11871635-11871788,11871838-11871917
          Length = 700

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 260 SKMKITVKQLQGGECLIXIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQM 439
           S ++I +K L      + +   + +  LK  +A    I  EQQ+         DD  +  
Sbjct: 101 STIEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDDELLSA 160

Query: 440 YPNIKEXTKLNLVVKKP 490
           Y ++++   L+LVV++P
Sbjct: 161 Y-HVEDGHTLHLVVRQP 176


>03_05_0823 -
           27970038-27970258,27970279-27970544,27970608-27970657,
           27971272-27971538,27971633-27972001,27972373-27973278
          Length = 692

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -3

Query: 162 QQRLMIQESVQRMNELKLVLSVNIRS*TEINDGE*SQRIRVYNKHQVVRKSLN 4
           +QRLM+ E+V + + L   L  ++   +++ DG     I+ +N H V ++ ++
Sbjct: 377 EQRLMV-ETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLHAVFKEVMS 428


>03_02_0188 + 6251256-6251561
          Length = 101

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 503 DASFKHYKRQXMSDKDAANTANKLLXIVQXKFDKMSXDEVDRLCYDCLLD 652
           D S++H     +  KD AN  +  + ++  KF+  S  +  R+ YD L D
Sbjct: 33  DVSYQHAGHAAV--KDNANETHFNIRVISPKFEGQSLVKRHRMVYDLLTD 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,261,013
Number of Sequences: 37544
Number of extensions: 218611
Number of successful extensions: 387
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)