Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L08
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2445|AAF55498.1|  130|Drosophila melanogaster CG7215-PA...    79   7e-15
AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-P...    31   1.8  
AF136606-1|AAD33695.1|  414|Drosophila melanogaster DHR23 protein.     29   5.5  
AF132147-1|AAD33594.1|  414|Drosophila melanogaster DNA repair p...    29   5.5  
AE014135-60|AAF59352.1|  414|Drosophila melanogaster CG1836-PA, ...    29   5.5  
AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA...    28   9.6  

>AE014297-2445|AAF55498.1|  130|Drosophila melanogaster CG7215-PA,
           isoform A protein.
          Length = 130

 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 44/122 (36%), Positives = 68/122 (55%)
 Frame = +2

Query: 266 MKITVKQLQGGECLIXIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQMYP 445
           M+IT+K L+G +C I + P+  I E+K  +  +L I    QK         ++ TI  YP
Sbjct: 1   MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYP 60

Query: 446 NIKEXTKLNLVVKKPESLYDASFKHYKRQXMSDKDAANTANKLLXIVQXKFDKMSXDEVD 625
           NIKE TKLNLVV KP  L D+  + + R+  S+  A    N+ +   + K ++ S D+++
Sbjct: 61  NIKEGTKLNLVVIKP-CLRDSILRGF-RKHYSEPLAERMTNEFMADFERKINEQSLDDLE 118

Query: 626 RL 631
           RL
Sbjct: 119 RL 120


>AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-PA
           protein.
          Length = 706

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 272 ITVK-QLQGGECLIXIYPS-MLISELKRHVARKLHIPVE 382
           +TVK +L   E L  +YP+ ML+ E+K+ +ARK  +  E
Sbjct: 56  VTVKFRLSDSEILAQVYPNCMLLGEIKQDLARKFEVAPE 94


>AF136606-1|AAD33695.1|  414|Drosophila melanogaster DHR23 protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +2

Query: 266 MKITVKQLQGGECLIXIYPSMLISELKRHV--ARKLHIPVEQQKXXXXXXXXXDDHTIQM 439
           M IT+K LQ     I   P   + ELK+ +   R      E+QK         DD T+  
Sbjct: 1   MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGS 60

Query: 440 YPNIKEXTKLNLVVKKPES 496
           Y N+ E   + +++ +  S
Sbjct: 61  Y-NVDEKKFIVVMLTRDSS 78


>AF132147-1|AAD33594.1|  414|Drosophila melanogaster DNA repair
           protein Rad23 protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +2

Query: 266 MKITVKQLQGGECLIXIYPSMLISELKRHV--ARKLHIPVEQQKXXXXXXXXXDDHTIQM 439
           M IT+K LQ     I   P   + ELK+ +   R      E+QK         DD T+  
Sbjct: 1   MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGS 60

Query: 440 YPNIKEXTKLNLVVKKPES 496
           Y N+ E   + +++ +  S
Sbjct: 61  Y-NVDEKKFIVVMLTRDSS 78


>AE014135-60|AAF59352.1|  414|Drosophila melanogaster CG1836-PA,
           isoform A protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +2

Query: 266 MKITVKQLQGGECLIXIYPSMLISELKRHV--ARKLHIPVEQQKXXXXXXXXXDDHTIQM 439
           M IT+K LQ     I   P   + ELK+ +   R      E+QK         DD T+  
Sbjct: 1   MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGS 60

Query: 440 YPNIKEXTKLNLVVKKPES 496
           Y N+ E   + +++ +  S
Sbjct: 61  Y-NVDEKKFIVVMLTRDSS 78


>AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA
           protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 366 CIYLSNNKNYCYLVELYWMITL 431
           C+Y+S   N C +  LY+MITL
Sbjct: 175 CVYISYEYNACIIKILYFMITL 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,544,575
Number of Sequences: 53049
Number of extensions: 415571
Number of successful extensions: 932
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)