Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L08
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46670-4|AAC48175.1|  332|Caenorhabditis elegans Suppressor prot...    28   5.0  
U43891-1|AAB61087.1|  332|Caenorhabditis elegans SUP-10 precurso...    28   5.0  
AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z78416-8|CAB01683.2|  588|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z69717-4|CAA93533.2|  588|Caenorhabditis elegans Hypothetical pr...    27   8.8  
EU068466-1|ABU49431.1|  801|Caenorhabditis elegans PRO-3 protein.      27   8.8  
AL132948-40|CAD31812.3|  801|Caenorhabditis elegans Hypothetical...    27   8.8  

>U46670-4|AAC48175.1|  332|Caenorhabditis elegans Suppressor protein
           10 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 273 IFILEIILTVLKYCVTKEPGVFNT*DGERRGSGTPRSQQRLMIQESVQRMNELKLV 106
           +FI  I+L  L YC   +   F   D    G GTP+S+   +I+E ++    + LV
Sbjct: 5   VFIFLIVLIDLIYCWNSKRSFFIP-DFLGSGDGTPKSKTESVIEERMEYGRMILLV 59


>U43891-1|AAB61087.1|  332|Caenorhabditis elegans SUP-10 precursor
           protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 273 IFILEIILTVLKYCVTKEPGVFNT*DGERRGSGTPRSQQRLMIQESVQRMNELKLV 106
           +FI  I+L  L YC   +   F   D    G GTP+S+   +I+E ++    + LV
Sbjct: 5   VFIFLIVLIDLIYCWNSKRSFFIP-DFLGSGDGTPKSKTESVIEERMEYGRMILLV 59


>AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical
           protein Y50D7A.4 protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 476 VVKKPESLYDASFKHYKRQXMSDKD 550
           +++K E  YD + K YKR  M +KD
Sbjct: 95  LIQKTEKKYDEAIKAYKRALMLEKD 119


>Z78416-8|CAB01683.2|  588|Caenorhabditis elegans Hypothetical
           protein E01G6.3 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
 Frame = +1

Query: 4   IQRFTND-LVFVIDPYSLRLFSVIYFGLTSDIHRQ---HE----LKFIH-PLN*FLNHK 153
           ++R+  + +VF+I  Y L +F ++YFG  + + +    H+    L+FIH  ++ F  HK
Sbjct: 141 LERYVKENVVFIIPAYRLGIFGLLYFGSNNLVPQNLAIHDCELALRFIHQEISNFGGHK 199


>Z69717-4|CAA93533.2|  588|Caenorhabditis elegans Hypothetical
           protein E01G6.3 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
 Frame = +1

Query: 4   IQRFTND-LVFVIDPYSLRLFSVIYFGLTSDIHRQ---HE----LKFIH-PLN*FLNHK 153
           ++R+  + +VF+I  Y L +F ++YFG  + + +    H+    L+FIH  ++ F  HK
Sbjct: 141 LERYVKENVVFIIPAYRLGIFGLLYFGSNNLVPQNLAIHDCELALRFIHQEISNFGGHK 199


>EU068466-1|ABU49431.1|  801|Caenorhabditis elegans PRO-3 protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 37  IDPYSLRLFSVIYFGLTSDIHRQHELKFIHPLN*FLNHK 153
           +D + +RLF +        IHR H L F   L+ FL  K
Sbjct: 354 MDNFEVRLFKIALCARIIGIHRLHTLSFYSYLHRFLQPK 392


>AL132948-40|CAD31812.3|  801|Caenorhabditis elegans Hypothetical
           protein Y39B6A.14 protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 37  IDPYSLRLFSVIYFGLTSDIHRQHELKFIHPLN*FLNHK 153
           +D + +RLF +        IHR H L F   L+ FL  K
Sbjct: 354 MDNFEVRLFKIALCARIIGIHRLHTLSFYSYLHRFLQPK 392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,273,197
Number of Sequences: 27780
Number of extensions: 220855
Number of successful extensions: 472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)