Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L06
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 159 KERVYSIPSLQRRRWSLCSSKAVW 230
           K+ +  +PS +R  W  C   A W
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFW 140


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 159 KERVYSIPSLQRRRWSLCSSKAVW 230
           K+ +  +PS +R  W  C   A W
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFW 140


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 159 KERVYSIPSLQRRRWSLCSSKAVW 230
           K+ +  +PS +R  W  C   A W
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFW 140


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 159 KERVYSIPSLQRRRWSLCSSKAVW 230
           K+ +  +PS +R  W  C   A W
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFW 140


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 454 AETYFDVAGRLHVGVDATVST 392
           A  +FD++    +G+ AT++T
Sbjct: 325 AANFFDISRSTFLGILATITT 345


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 406 HQPLHVVSLPHRSMSQRTRRC 468
           HQ  H  ++ H  +S    RC
Sbjct: 314 HQQHHQQNMSHEELSAMVNRC 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,085
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)