Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_L06
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 127 3e-29
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 127 3e-29
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 127 3e-29
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 127 3e-29
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 127 3e-29
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 127 3e-29
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 124 3e-28
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 80 5e-15
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 30 6.5
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 127 bits (306), Expect = 3e-29
Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRAHGRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 124 bits (298), Expect = 3e-28
Identities = 71/160 (44%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 VXYSWEPDNPDEIMQSAWFKPPLFTLRTHMRPQW-QSERCRSVVLFVTSKT*LKRKSVFH 178
V YS +P+NP + +S + T Q + R ++ T K+ F
Sbjct: 2 VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFR 61
Query: 179 XXXXXXXXXXXXKQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 358
KQ Q RWPKKS EFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 62 RYNGGVGRCAQAKQWGWTQ--GRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 359 NRAPCLRRXTYRAHGRINPYM*SPCHIEVCLSEREDAVAR 478
N+AP +RR TYRA GRINPYM SPCHIE+ L+E+E V +
Sbjct: 120 NKAPKMRRRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 80.2 bits (189), Expect = 5e-15
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +2
Query: 215 KQSSLAQHRXRWPKKSXEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRXTYR 394
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Query: 395 AHGRINPYM*SPCHIEVCLSER 460
AHG+INPY+ S CHIE+ L+E+
Sbjct: 68 AHGQINPYVTSACHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 334 ASYRPHSGKSRALPTQXYIPCSRSHQPLHVVSLPHR-SMSQRTRR 465
+S R HS S+ L +Q + P SRSH P PH S S R+ R
Sbjct: 92 SSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,200,877
Number of Sequences: 237096
Number of extensions: 1434500
Number of successful extensions: 2882
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2868
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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