Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L05
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.47 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.62 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.62 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.3  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   4.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
 Frame = +2

Query: 260 MDLVSLETSDEN--EWVKARIVQDXIKYIWTSGRLCDF-KGCNRP-----DLLPNEINGW 415
           + +V L+T+ E   EW K     +     W      +F KG N       D+  N +N W
Sbjct: 13  VSVVLLDTTQEEKLEWTKYPFGAEANTPGWVEESFTNFDKGINWRSYVVCDVAYNNVNNW 72

Query: 416 FWTAELQK 439
            WT  +++
Sbjct: 73  LWTPFIER 80


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 250 SAVVSCAQPVFFDAAERWVPP 188
           S  + C   +F +AA  WVPP
Sbjct: 12  SLALLCLHAIFVNAAPDWVPP 32


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 250 SAVVSCAQPVFFDAAERWVPP 188
           S  + C   +F +AA  WVPP
Sbjct: 12  SLALLCLHAIFVNAAPDWVPP 32


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 260 MDLVSLETSDENEWVK---ARIVQDXIKYIWTSGRLCDFK 370
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 260 MDLVSLETSDENEWVK---ARIVQDXIKYIWTSGRLCDFK 370
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
 Frame = +2

Query: 203 LRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDXIK--------YIWTSGRL 358
           ++ +E+    A+    +  +DLV   TSD+++W +  I              YIW    +
Sbjct: 97  IKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVD-PV 155

Query: 359 CDFKGCNRPDLLPNE----INGWFWT 424
            D KG    D  PN      NG  WT
Sbjct: 156 KDDKGNPIKDKYPNNWLSVFNGTGWT 181


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 398 NEINGWFWTAELQKLA 445
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 282 PAMKMNGSKRVLSRTX*STFGHRAVFVTSKDATDLTYYLTK*TVGSGLLSCRSWLPPPTV 461
           P  ++ G ++  S    ST  +  +    +    + YYL +  + SGL+   SW+    +
Sbjct: 186 PQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWV-SFWL 244

Query: 462 NRTTGPKVAAL 494
           NR   P   AL
Sbjct: 245 NRNATPARVAL 255


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,869
Number of Sequences: 438
Number of extensions: 3811
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)