Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L03
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630...    52   3e-07
07_03_0056 - 12863599-12863715,12864107-12864235,12864322-128644...    31   1.0  
02_01_0099 + 726576-727105,727899-728048,728510-728635,728726-72...    30   1.8  
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776...    28   7.3  

>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
            29363099-29363206,29363583-29363697,29363781-29364819,
            29364904-29365014,29365268-29365326,29366601-29366763,
            29367162-29367435,29367530-29367680,29367766-29367877,
            29367978-29368143,29368261-29368331,29368474-29368565,
            29368721-29368883,29369134-29369205,29369236-29369263,
            29369519-29369910,29369991-29370106,29370201-29370498,
            29370820-29371139,29371332-29371590,29371985-29372302,
            29372423-29372527,29372648-29372776,29374001-29374381,
            29374467-29374604,29374949-29375185,29375264-29375569
          Length = 2094

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
 Frame = +2

Query: 422  IRSRCLXEG-RLFEDPEFPAVDRSLYY---KESLDRPIT--WLRPGEI------SDNPQL 565
            +R   + +G R F D EFP  DRSL+      SL   +   W+RP +I      S  P L
Sbjct: 1627 VREALIAKGERNFTDQEFPPDDRSLFVDPMNPSLKLQVVSEWMRPSDIAKEVSISSQPCL 1686

Query: 566  FVEGYSRFDVQQGELGDCWLLAAVA 640
            F    +  DV QG LGDCW L+AVA
Sbjct: 1687 FSGSVNSSDVCQGRLGDCWFLSAVA 1711


>07_03_0056 -
           12863599-12863715,12864107-12864235,12864322-12864408,
           12864657-12864848,12864930-12865106,12865174-12865420,
           12865510-12865619,12865751-12865851,12865937-12866000,
           12866433-12866522,12866621-12866719,12866817-12866897,
           12867197-12867535
          Length = 610

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 359 KVLGETRPSSFGPATYQDFKDIRSR-CLXEGRLFEDPEFPAVDRSLYY 499
           KV G+T P  +GP T  D++D + R CL      E P    ++ S Y+
Sbjct: 173 KVWGKTGPKLYGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYF 220


>02_01_0099 +
           726576-727105,727899-728048,728510-728635,728726-729714,
           729776-729818,730101-730218,730743-730853
          Length = 688

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 24/85 (28%), Positives = 38/85 (44%)
 Frame = -3

Query: 643 VGNGSQQPTIAQLSLLDVEATVAFDEKLRVVADFPRSEPSDGPVQALLVVEAAVHGRKLG 464
           VG+G   P +     ++ EA V  + ++    +  RS     P     VVEAA HG++  
Sbjct: 88  VGSGDSSPAVR----VEEEAEVEAEAEVGTAVEPQRSGTLASPTD---VVEAAQHGQRQQ 140

Query: 463 VFEESTFX*APRSYVFEVLIRSRTE 389
              +S    +PRSY   V+ +   E
Sbjct: 141 QASQSQQTPSPRSYAAAVVNKREDE 165


>01_05_0699 -
           24376987-24377154,24377259-24377406,24377530-24377645,
           24377743-24377925,24377998-24378186,24378273-24378497,
           24378514-24378759,24378836-24378983,24379126-24379241,
           24379441-24379497,24379735-24379923,24380001-24380150,
           24380323-24380404,24380484-24380601,24380713-24380899,
           24381044-24381138,24381223-24381277,24381376-24381567,
           24381657-24381853,24382534-24382684
          Length = 1003

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 380 PSSFGPATYQDFKDIRSRCLXEGRLFEDPE---FPAVDRSLYYKESLDRPITWLRPGEIS 550
           P S  P +   F D R+ C   G L        F  +DR+L  K    + +  ++ G++ 
Sbjct: 69  PESILPPSANSFGD-RNNCPVPGTLLNTNNMRGFQNLDRALLLKAEAKKILHDIKSGKVE 127

Query: 551 DNPQLFV 571
           +NP L +
Sbjct: 128 ENPALLL 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,483,807
Number of Sequences: 37544
Number of extensions: 370514
Number of successful extensions: 934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)