Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_L03
(645 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 46 2e-05
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 46 2e-05
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 46 2e-05
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 46 2e-05
At5g22300.1 68418.m02601 nitrilase 4 (NIT4) identical to SP|P460... 30 1.1
At2g46380.1 68415.m05773 hypothetical protein weak similarity to... 28 4.6
At1g58110.1 68414.m06587 bZIP family transcription factor simila... 27 8.1
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +2
Query: 455 FEDPEFPAVDRSLYYK-----ESLDRPITWLRPGEI-----SDN-PQLFVEGYSRFDVQQ 601
F D EFP DRSL+ L W+RP I SD+ P LF + DV Q
Sbjct: 1696 FTDQEFPPNDRSLFVDTQNPPSKLQVVSEWMRPDSIVKENGSDSRPCLFSGDANPSDVCQ 1755
Query: 602 GELGDCWLLAAVA 640
G LGDCW L+AVA
Sbjct: 1756 GRLGDCWFLSAVA 1768
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +2
Query: 455 FEDPEFPAVDRSLYYK-----ESLDRPITWLRPGEI-----SDN-PQLFVEGYSRFDVQQ 601
F D EFP DRSL+ L W+RP I SD+ P LF + DV Q
Sbjct: 1696 FTDQEFPPNDRSLFVDTQNPPSKLQVVSEWMRPDSIVKENGSDSRPCLFSGDANPSDVCQ 1755
Query: 602 GELGDCWLLAAVA 640
G LGDCW L+AVA
Sbjct: 1756 GRLGDCWFLSAVA 1768
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +2
Query: 455 FEDPEFPAVDRSLYYK-----ESLDRPITWLRPGEI-----SDN-PQLFVEGYSRFDVQQ 601
F D EFP DRSL+ L W+RP I SD+ P LF + DV Q
Sbjct: 1696 FTDQEFPPNDRSLFVDTQNPPSKLQVVSEWMRPDSIVKENGSDSRPCLFSGDANPSDVCQ 1755
Query: 602 GELGDCWLLAAVA 640
G LGDCW L+AVA
Sbjct: 1756 GRLGDCWFLSAVA 1768
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +2
Query: 455 FEDPEFPAVDRSLYYK-----ESLDRPITWLRPGEI-----SDN-PQLFVEGYSRFDVQQ 601
F D EFP DRSL+ L W+RP I SD+ P LF + DV Q
Sbjct: 1696 FTDQEFPPNDRSLFVDTQNPPSKLQVVSEWMRPDSIVKENGSDSRPCLFSGDANPSDVCQ 1755
Query: 602 GELGDCWLLAAVA 640
G LGDCW L+AVA
Sbjct: 1756 GRLGDCWFLSAVA 1768
>At5g22300.1 68418.m02601 nitrilase 4 (NIT4) identical to SP|P46011
Nitrilase 4 (EC 3.5.5.1) {Arabidopsis thaliana}
Length = 355
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 502 LVVEAAVHGRKLGVFEESTFX*APRSYVFEVLIRSRT 392
L+ EAA +G +L VF E+ PR FE+ I SRT
Sbjct: 60 LLSEAAENGSQLVVFPEAFIGGYPRGSTFELAIGSRT 96
>At2g46380.1 68415.m05773 hypothetical protein weak similarity to
extra-large G-protein [Arabidopsis thaliana] GI:3201682
Length = 732
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 425 RSRCLXEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQL 565
+S C +P F +RS + SL P T++ PG S PQL
Sbjct: 279 QSTCSWLPDALRNPGFYPHERSFGFGTSLHSPRTFIPPGSQSPGPQL 325
>At1g58110.1 68414.m06587 bZIP family transcription factor similar
to bZIP transcriptional activator RSG GI:8777512 from
[Nicotiana tabacum]; contains PFAM profile: bZIP
transcription factor PF00170
Length = 374
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 166 LAMAGQNGGG-NFGALIQGRGKTVA*SRRPGSTELWCSSPR 285
L A +NGGG N GAL + TV S R E + P+
Sbjct: 174 LPFARENGGGKNLGALYMSQDATVISSERKNYAEPFSHDPK 214
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,665,717
Number of Sequences: 28952
Number of extensions: 280870
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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