Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_L01
         (535 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161...    29   2.4  
10_01_0342 - 3764967-3765355,3766094-3766298                           28   5.4  

>03_05_1133 - 30614901-30615389,30615823-30615933,30616113-30616178,
            30616347-30616406,30616493-30616801,30616960-30617108,
            30617200-30617269,30617370-30617494,30617516-30617573,
            30618176-30618370,30618585-30618857,30618950-30619120,
            30619203-30619333,30619423-30619582,30619712-30619900,
            30620023-30620118,30620381-30620611,30620715-30620853,
            30620903-30621057,30621160-30621378
          Length = 1131

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 331  SICXMLRYIKQEVNELKKKKQMNPKLHFNTEVKYII 224
            S+C     +K+E+++L +KK  +P    + E KYI+
Sbjct: 950  SLCECYLQLKEELDKLVQKKLEDPSFDIHKEGKYIL 985


>10_01_0342 - 3764967-3765355,3766094-3766298
          Length = 197

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 346 ECPNQSICXMLRYIKQEVNELKKKKQMNPKLHFNT 242
           + P  S   ++  I ++V  +KKKK+ +PK ++NT
Sbjct: 95  DVPGLSPADLIVEIDEDVLVIKKKKKASPKSNYNT 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,998,844
Number of Sequences: 37544
Number of extensions: 125279
Number of successful extensions: 172
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)