Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K22
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0765 + 22980542-22980570,22980673-22980748,22981113-229812... 140 1e-33
03_01_0015 + 126611-126639,126718-127099 112 2e-25
03_05_0889 + 28543106-28543354,28544379-28544465,28544548-285446... 35 0.061
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 33 0.14
10_08_0500 - 18357828-18358649 31 1.00
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 29 2.3
04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614 28 5.3
02_05_0282 - 27454714-27455814 28 5.3
>12_02_0765 +
22980542-22980570,22980673-22980748,22981113-22981271,
22981370-22981450
Length = 114
Score = 140 bits (338), Expect = 1e-33
Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
Frame = +1
Query: 235 IQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHXVXELTHINPDVX 414
++FC+ECNN+LYP+ED++ K+LLYACRNCD++++AD+NCVY N + H E T + DV
Sbjct: 4 MKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVA 63
Query: 415 SDPTLPXTKDHMCPKCNHREAVFFQGQTXRAEQXMXLYYVC--TXCKHXWTE 564
DPTLP TK C C H EAVFFQ T R E+ M L++VC C H W E
Sbjct: 64 GDPTLPRTKAVRCAVCGHGEAVFFQA-TARGEEGMTLFFVCCNPSCGHRWRE 114
>03_01_0015 + 126611-126639,126718-127099
Length = 136
Score = 112 bits (270), Expect = 2e-25
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 24/134 (17%)
Frame = +1
Query: 235 IQFCQECNNMLYPREDKNNKVLLYACRNCDYK----------------------QLADSN 348
++FC+ECNN+LYP+E+K+ ++LL+ACRNC+++ ++++S
Sbjct: 4 MKFCRECNNILYPKEEKDRRLLLFACRNCEHQVHTLIISIRLWRRRNLKKQQQQEVSESK 63
Query: 349 CVYVNKIMHXVXELTHINPDVXSDPTLPXTKDHMCPKCNHREAVFFQGQTXRAEQXMXLY 528
CVY N++ H E T + DV SDPTLP TK C C H EAVFFQ T R E+ M L+
Sbjct: 64 CVYRNEVAHAAGERTQVLQDVASDPTLPRTKTVRCAACGHGEAVFFQA-TARGEEGMTLF 122
Query: 529 YVC--TXCKHXWTE 564
+VC C H W E
Sbjct: 123 FVCCNLTCAHRWRE 136
>03_05_0889 +
28543106-28543354,28544379-28544465,28544548-28544604,
28544704-28544781
Length = 156
Score = 34.7 bits (76), Expect = 0.061
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 436 TKDHMCPKCNHREAVFFQGQTXRAEQXMXLYYVCTXCKHXWTE 564
T + C KC + E ++ Q A++ ++Y C C+H + E
Sbjct: 112 TVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNE 154
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 451 CPKCNHREAVFFQGQTXRAEQXMXLYYVC--TXCKHXWTE 564
CP+C + EA + Q Q A++ M +Y C C+ W E
Sbjct: 796 CPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRE 835
>10_08_0500 - 18357828-18358649
Length = 273
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 421 PTLPXTKDHMCPKCNHREAVFFQGQTXRAEQXMXLYYVCTXCKHXWTE 564
P LP CP+C F Q Y+C C+ WTE
Sbjct: 96 PPLPRPPPRQCPRCGSANTKFCYYNNYSRTQPR---YLCKACRRHWTE 140
>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 169 INSKEMSAISLSRKDGGPGYVGIQFCQECNNMLYPREDK--NNKVLLYACRNCD-YKQLA 339
I S ++ I+L D G ++F Q C N+LY D + L +NC ++L
Sbjct: 1543 IGSSNLALIALKINDSGSSSDIVKFLQGCVNLLYLTIDSCIDLITLPEPIKNCHCLRKLE 1602
Query: 340 DSNCVYVNKIMHXVXELTHI 399
+NC + + + ELT +
Sbjct: 1603 ITNCWNFSVLPEWLGELTFL 1622
>04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614
Length = 411
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +1
Query: 451 CPKCNHREAVFFQGQTXRAEQXMXLYYVCTXCKHXWTE 564
CP+CN F +Q Y C C+ WTE
Sbjct: 65 CPRCNSTNTKFCYYNNYSLQQPR---YFCKTCRRYWTE 99
>02_05_0282 - 27454714-27455814
Length = 366
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +1
Query: 451 CPKCNHREAVFFQGQTXRAEQXMXLYYVCTXCKHXWTE 564
CP+CN F +Q Y C C+ WTE
Sbjct: 67 CPRCNSTNTKFCYYNNYSLQQPR---YFCKTCRRYWTE 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,029,355
Number of Sequences: 37544
Number of extensions: 214507
Number of successful extensions: 388
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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