Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K22
         (629 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0)                66   3e-11
SB_59179| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.58 
SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)              28   5.4  
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.4  
SB_28585| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_24680| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  

>SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0)
          Length = 413

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +1

Query: 379 VXELTHINPDVXSDPTLPXTKDHMCPKCNHREAVFFQGQTXRAE 510
           V ELT I  DV +DPTLP T+DH CP+C HRE+VFFQ Q+ +A+
Sbjct: 37  VRELTQIVGDVIADPTLPRTEDHECPRCGHRESVFFQSQSSKAD 80


>SB_59179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 116

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -2

Query: 154 FKDNITTSNRFLTLNLTIDMKDYSRGVVIKF----YVYHYVHSWC 32
           +K  +   + +LT N  ++M DY     I+F    ++YHY HSWC
Sbjct: 9   YKHFVELRHTYLTENRQLNMYDYRENDGIEFALWSHLYHY-HSWC 52


>SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)
          Length = 644

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 328 YNHNFCTRTAKLCYFYLRAGKAYCYILDKIVCRHNQDRRLF 206
           Y   +C +T+ +C  + RA  A   +   +V  HN +  +F
Sbjct: 257 YFRGYCYKTSDICLSWKRAESACAVLSSGLVSVHNHEENVF 297


>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 328 YNHNFCTRTAKLCYFYLRAGKAYCYILDKIVCRHNQDRRLF 206
           Y   +C +T+ +C  + RA  A   +   +V  HN +  +F
Sbjct: 271 YFRGYCYKTSDICLSWKRAQSACAVLSSGLVSVHNHEENVF 311


>SB_28585| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 250

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 241 FCQECNNMLYPREDKNNKVLLYACRNCDYK 330
           F Q C N  +    K  KV + +C+NC +K
Sbjct: 43  FVQNCKNCDFSLNQKAVKVFVDSCKNCVFK 72


>SB_24680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 616

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +1

Query: 271 PREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHXVXELTHINPDVXSD 420
           PR+  +  + L  C NC +K  +  N   +++I   +       PD+ +D
Sbjct: 138 PRKGNSTIMDLLRCFNCHHKSPSHENFFNISEIHKSITTKERNKPDIDND 187


>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 744

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = +1

Query: 199 LSRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHX 378
           L RK G  GY    F +   ++L    D + + +   C +C    +A  NC+Y N+ +  
Sbjct: 263 LPRK-GVKGYPSNIFIKNVIDILNNGSDASKRPI--NCSSCASNAIASHNCIYCNEKLCG 319

Query: 379 VXELTH 396
              +TH
Sbjct: 320 ECAMTH 325


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,246,625
Number of Sequences: 59808
Number of extensions: 284840
Number of successful extensions: 658
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)