Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K22
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical ...   172   2e-43
Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    45   4e-05
AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical ...    44   1e-04
U80452-2|AAK68180.1|  729|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z92829-4|CAD54131.1|  569|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.5 protein.
          Length = 167

 Score =  172 bits (419), Expect = 2e-43
 Identities = 73/129 (56%), Positives = 97/129 (75%), Gaps = 4/129 (3%)
 Frame = +1

Query: 190 AISLSRKDG--GPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVN 363
           A S + K G  GPG+VGI+FC ECNNMLYPREDK ++VL+Y+CRNC+++++A + C+YVN
Sbjct: 39  APSQNEKPGKSGPGFVGIKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVN 98

Query: 364 KIMHXVXELTHINPDVXSDPTLPXTKDHMCPKCNHREAVFFQGQTXRAEQXMXLYYVCT- 540
           K++H + ELT I  D+  DPTLP T++H CP C   +AVFFQ QT +AE+ M LYYVC  
Sbjct: 99  KLVHEIDELTQIVGDIIHDPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCAS 158

Query: 541 -XCKHXWTE 564
             C+H WTE
Sbjct: 159 QDCQHRWTE 167


>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +1

Query: 307 ACRNCDYKQLADSNCVYVNKIMHXVXELTHINPD-VXSDPTLPXTKDHMCPKCNHREAVF 483
           +C+ C  +         V   +  + E T  + D + +D +     DH+C KC H +A +
Sbjct: 31  SCKVCSTRWAVKERVDQVVSRVEKIYERTVADTDGIENDESADAVVDHICTKCGHSKASY 90

Query: 484 FQGQTXRAEQXMXLYYVCTXCK 549
              QT  A++   ++Y C  CK
Sbjct: 91  STMQTRSADEGQTVFYTCLKCK 112


>AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical
           protein Y77E11A.6 protein.
          Length = 108

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = +1

Query: 235 IQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHXVXELTHINPDVX 414
           + FC EC  +L  + +   + + ++C  C Y  +        ++I   + ++  +     
Sbjct: 2   LTFCPECGCVL--QIESGEQCMRFSCPACPY--VCPVTQTVTSRIYPKLKDIDDVLGGPG 57

Query: 415 SDPTLPXTKDHMCPKCNHREAVFFQGQTXRAEQXMXLYYVC--TXCKHXWTE 564
           +      T D  CP C+H  A F Q QT  A++   ++Y C    C H W +
Sbjct: 58  AWANAQVT-DETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWKD 108


>U80452-2|AAK68180.1|  729|Caenorhabditis elegans Hypothetical
           protein C16C8.2 protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 256 NNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHXVXELTHINP 405
           NN ++P  DKNN V+    R   +  LA  + +Y+ +       L  +NP
Sbjct: 379 NNRVFPPVDKNNNVVAGDDRANIFVGLASLHVLYLRQHNRIAATLQRVNP 428


>Z92829-4|CAD54131.1|  569|Caenorhabditis elegans Hypothetical
           protein F10A3.4 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 25/94 (26%), Positives = 40/94 (42%)
 Frame = +1

Query: 175 SKEMSAISLSRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCV 354
           S  M++  LS  D     VG+Q      +  YPR+   N  +     N  Y Q+A ++  
Sbjct: 396 SLNMNSFLLSASDQMNLSVGVQDQNATYSYQYPRDQNINTTVSV---NGTYLQVALNSSA 452

Query: 355 YVNKIMHXVXELTHINPDVXSDPTLPXTKDHMCP 456
             +  +    E+T++N  + S  TLP T     P
Sbjct: 453 TSD--VRLSFEMTYLNDIIGSTTTLPTTTTTQTP 484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,234,512
Number of Sequences: 27780
Number of extensions: 220768
Number of successful extensions: 528
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)