Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K22
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.61 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.4  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   9.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 12/56 (21%), Positives = 28/56 (50%)
 Frame = +1

Query: 190 AISLSRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVY 357
           A++ S  +GG   + +Q     N ++Y  +DK + +++Y   +  + +L  +   Y
Sbjct: 179 AVNASTGNGGLVSLVVQAMDPVNTIVYMADDKGDALIVYQNSDESFHRLTSNTFDY 234


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 59  RLSLCSQLVFLLSLVNEKW 3
           +L +CS LVF+  L+N  W
Sbjct: 768 QLIICSGLVFVQILINGVW 786


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
 Frame = +1

Query: 244 CQECN------NMLYPREDKNNKVLLYACRNCDY 327
           C++C+      +ML      ++ V  Y C NC Y
Sbjct: 19  CEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTY 52


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 145 NITTSNRFLTLNLTIDMKDYSRGVVIKFYVYHYVH 41
           NIT  N     N+  ++  Y+    +K ++  Y H
Sbjct: 54  NITWYNEGQAWNIEANIDSYTNAAAVKEFLSIYKH 88


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 145 NITTSNRFLTLNLTIDMKDYSRGVVIKFYVYHYVH 41
           NIT  N     N+  ++  Y+    +K ++  Y H
Sbjct: 54  NITWYNEGQAWNIEANIDSYTNAAAVKEFLSIYKH 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,589
Number of Sequences: 438
Number of extensions: 2359
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)