Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K21
(461 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 111 5e-24
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 110 2e-23
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 98 9e-20
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 97 1e-19
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 95 5e-19
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 93 2e-18
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 87 1e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 81 2e-14
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 78 8e-14
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 78 8e-14
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 75 1e-12
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 68 1e-10
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 66 3e-10
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 66 3e-10
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 64 2e-09
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 61 1e-08
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 60 2e-08
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 59 4e-08
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 58 7e-08
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 52 5e-06
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 48 7e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 43 0.003
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 38 0.14
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.32
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.56
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 35 0.99
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.7
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.0
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 33 4.0
UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner... 33 4.0
UniRef50_A0LGL6 Cluster: Phospholipid/glycerol acyltransferase; ... 33 4.0
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 4.0
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 4.0
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 4.0
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 4.0
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 4.0
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.0
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 32 5.3
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 5.3
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 32 7.0
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 7.0
UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-li... 32 7.0
UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2; ... 32 7.0
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 7.0
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 7.0
UniRef50_Q09DH2 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 9.2
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 111 bits (268), Expect = 5e-24
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
R +V+FE RYK+GKNKWFF KLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 4e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 110 bits (264), Expect = 2e-23
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+ +FE RYK+GKNKWFF KLRF
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 91.5 bits (217), Expect = 8e-18
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP + ++ GK+
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 97.9 bits (233), Expect = 9e-20
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+ + FE R+++GKN+WFF KLRF
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 74.9 bits (176), Expect = 8e-13
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP + ++ G +
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 222 *NPQEVQDKAF 254
+ + K F
Sbjct: 61 KVAKRTKIKPF 71
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 97.5 bits (232), Expect = 1e-19
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+
Sbjct: 104 PQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQRED 163
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+ + FE +Y SGKNKWFF LRF
Sbjct: 164 AKKQIKQIFEEKYTSGKNKWFFTPLRF 190
Score = 39.9 bits (89), Expect = 0.026
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 215
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP++ + G
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMG 112
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 95.5 bits (227), Expect = 5e-19
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+ + E RY SGKN+WFF LRF
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP + + GK+
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKK 110
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 93.5 bits (222), Expect = 2e-18
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 218
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+ + K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNK 59
Score = 39.1 bits (87), Expect = 0.046
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVK 261
P +V +RM K ++HKRSKIKPF+K
Sbjct: 50 PRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 87.4 bits (207), Expect = 1e-16
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPR+ GK+
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + KAF
Sbjct: 61 KFERRTRVKAF 71
Score = 72.1 bits (169), Expect = 5e-12
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKR 357
P KV MGK K +R+++K F K +NYNHLM TRY+V F +K F K+ + R
Sbjct: 50 PRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDR 109
Query: 358 KKLRFNTRVRFEXRYKSGKNKWFFXKLRF 444
K+ + + R+ + KN+WFF KLRF
Sbjct: 110 KEFKKELQTVMRERFLAAKNRWFFTKLRF 138
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 80.6 bits (190), Expect = 2e-14
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = +1
Query: 133 KVPPTSRTGMLSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS 312
+ P T +L++ +V K+M + K KRSK K F+K +NY+HLMPTRYT+D +
Sbjct: 80 RTAPFGCTEILTARSVAFENAQVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVN 139
Query: 313 FEKFSAKDLKDPAKRK-KLRFNTRVRFEXRYKSGKNKWFFXKLRF 444
F+ D+ D A +K + + E R+K+GK++WFF +L F
Sbjct: 140 FKDVVTSDVLDNATKKVAAQKEAKKLLEERFKTGKSRWFFTRLAF 184
Score = 70.9 bits (166), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 57 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQ 197
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PR+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRK 70
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 78.2 bits (184), Expect = 8e-14
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 369
P KV + M K I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + +
Sbjct: 49 PKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSK 108
Query: 370 FNTRVRFEXRYKSGKNKWFFXKLRF 444
R F+ RY +G N+WFF +LRF
Sbjct: 109 QLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 72.9 bits (171), Expect = 3e-12
Identities = 27/50 (54%), Positives = 42/50 (84%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQ 197
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP++
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKK 51
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 78.2 bits (184), Expect = 8e-14
Identities = 43/119 (36%), Positives = 66/119 (55%)
Frame = +1
Query: 88 AGTRVARLS*SRITTKVPPTSRTGMLSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVV 267
AG + + S + TK P R +L+ + P KV + M K I +RS++ F++VV
Sbjct: 19 AGHKAVIVQNSDVVTKERPYGRA-LLAGIKKY--PKKVVRGMSKQTIARRSQVGVFLRVV 75
Query: 268 NYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKNKWFFXKLRF 444
N+ H +PTRY VD S E ++ D +KR + + R F+ RY +G + WFF +LRF
Sbjct: 76 NHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 71.3 bits (167), Expect = 9e-12
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP++ + K+
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 74.5 bits (175), Expect = 1e-12
Identities = 30/51 (58%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPR 194
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPR 54
Score = 72.9 bits (171), Expect = 3e-12
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDP 348
P + + M + I KR+ I+ FVKVVNYNH+MPTRY + E F+ +
Sbjct: 53 PRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV 112
Query: 349 AKRKKLRFNTRVRFEXRYKSGKNKWFFXKLRF 444
AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 67.7 bits (158), Expect = 1e-10
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 218
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P + + K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 219 E 221
E
Sbjct: 77 E 77
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 318
P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V DF +
Sbjct: 67 PLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIK 110
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 66.5 bits (155), Expect = 3e-10
Identities = 25/62 (40%), Positives = 46/62 (74%)
Frame = +3
Query: 36 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 215
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P++ + G
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 216 KE 221
+
Sbjct: 74 SK 75
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 187 TPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 294
+P KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 64 SPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 66.5 bits (155), Expect = 3e-10
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 218
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPR+ + G+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 219 E 221
+
Sbjct: 959 K 959
Score = 64.9 bits (151), Expect = 8e-10
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 18/103 (17%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 345
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 949 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKN 1008
Query: 346 PAKRKKLRFNTRVRFEXRY----------KSGKNKWFFXKLRF 444
KRK+LR N R +Y K ++++ F KLRF
Sbjct: 1009 VEKRKELRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 345
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 160 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKN 219
Query: 346 PAKRKKLRFNTRVRFEXRY----------KSGKNKWFFXKLRF 444
KRK LR N R +Y K ++++ F KLRF
Sbjct: 220 VEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
Score = 32.7 bits (71), Expect = 4.0
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAG 101
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 61.3 bits (142), Expect = 1e-08
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +3
Query: 54 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 218
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P + ++ K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSK 151
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 297
P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 142 PLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/71 (38%), Positives = 48/71 (67%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P + ++ +
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 222 *NPQEVQDKAF 254
+ ++ KAF
Sbjct: 61 KIEKRLKLKAF 71
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRK 360
P KV K+M KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK
Sbjct: 50 PMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRK 109
Query: 361 KLRFNTRVRFEXRYKSGKN 417
+ R + + E + + +N
Sbjct: 110 EARKSVKAVLEECFSNPEN 128
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 191
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAP 50
Score = 55.2 bits (127), Expect = 7e-07
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAK 354
P K+ ++M R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K
Sbjct: 50 PLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGK 107
Query: 355 RKKLRFNTRV--RFEXRYKSGKNKWFFXKLRF 444
+ + +F Y+ GK W F KLRF
Sbjct: 108 VYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 58.4 bits (135), Expect = 7e-08
Identities = 25/68 (36%), Positives = 46/68 (67%)
Frame = +3
Query: 51 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE*NP 230
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP++ ++ E
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 231 QEVQDKAF 254
++ Q K F
Sbjct: 63 KKTQVKLF 70
Score = 55.2 bits (127), Expect = 7e-07
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDP 348
P KV K M + K++++K FVK VN+NH+M TR+ V DF F+K S + LKD
Sbjct: 49 PKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDA 107
Query: 349 AKRKKLRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+K L +Y + K WFF L+F
Sbjct: 108 PAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKL 366
P ++ M + R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++
Sbjct: 48 PRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREI 107
Query: 367 RFNTRVRFEXRYKSGKNKWFFXKL 438
F+ R ++ WFF KL
Sbjct: 108 IETVNKDFQRRILEHRDTWFFTKL 131
Score = 40.3 bits (90), Expect = 0.020
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 51 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQ 197
I+KPG V +VL GR+AG+KA++V+ ++ +A VAGI PR+
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPH---NERGSYAIVAGIAALPRR 50
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 52.4 bits (120), Expect = 5e-06
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +1
Query: 214 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 393
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 394 XRYKSGKNKWFFXKLRF 444
KSG+NKWFF K RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 321
P K+ +GK KI KRSKIK FV V NYNHL RY+VD +K
Sbjct: 35 PRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 99 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 221
G +I+ + D+GTSDK Y HA VAGID YPR+ GK+
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGKK 45
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +1
Query: 196 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLK 342
K+ M K KI + K F+K +N H+ PTRY ++ + K K +
Sbjct: 50 KIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNE 109
Query: 343 DPAKRKKLRF-NTRVRFEXRYKSGKNKWFFXKLRF 444
++ K+ + + R GKN WFF K++F
Sbjct: 110 HTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 40.7 bits (91), Expect = 0.015
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKN 125
M I K G+VV+VLSG+YAG+KA V+KN
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 37.5 bits (83), Expect = 0.14
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 232 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEXRY 402
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 403 KSGKNKWFFXKLRF 444
K K K+ F L F
Sbjct: 113 KENKAKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 2.3
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 60 PGKVVLVLSGRYAGRKAIVVKNYDE 134
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.32
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = +3
Query: 30 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.56
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 34.7 bits (76), Expect = 0.99
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 63 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQ 242
GK++ L+G+YAG+ +VK+Y + + K + H V + + + + + Q
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTN-TKFTNKNSKSFISKMNDQ 66
Query: 243 DKAFREGCKL*SLDAN 290
K F+ KL L+AN
Sbjct: 67 PKIFKYKIKLKILNAN 82
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 30 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGID 182
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVD 262
>UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1480
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 178 STGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR 357
S+ TP + +R+G + S IK ++ V +H++PTRY + A L A R
Sbjct: 920 SSDTPADILQRLGDVNVSTMSHIKQQLEQVMPHHMVPTRYQIWARMPTSLAGKLDRKALR 979
Query: 358 KKL 366
K+L
Sbjct: 980 KEL 982
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.7
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 140
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 178 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 32
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 396 LFKTYSRVETQLLTFCRVFQV-FCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFI 220
LF+ Y + + LT + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 219 LSHPLVHFAG 190
SH + FAG
Sbjct: 505 PSHVKIIFAG 514
>UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner
membrane subunit; n=1; Roseiflexus sp. RS-1|Rep: Polar
amino acid ABC transporter, inner membrane subunit -
Roseiflexus sp. RS-1
Length = 403
Score = 32.7 bits (71), Expect = 4.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 230 WILFFPILLCTLPGVPVDTSD-ESMPVRLVGGTFVVIL 120
WIL+FPIL + GV D S +P L GG + +L
Sbjct: 167 WILYFPILFVLVSGVGADDSPIPPVPTNLWGGLLLTLL 204
>UniRef50_A0LGL6 Cluster: Phospholipid/glycerol acyltransferase;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Phospholipid/glycerol acyltransferase - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 244
Score = 32.7 bits (71), Expect = 4.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 297 ITCWHQVIIVYNLHERLYLGPLVDFIL---SHPLVHFAGGTCR 178
IT W +I++Y LH LY D +L S L+ + G CR
Sbjct: 18 ITLWISIIVIYRLHRGLYTRRHCDSLLRWWSRKLLRYVGMNCR 60
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 4.0
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 4.0
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 4.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 286 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 372
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 4.0
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 4.0
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.0
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 134
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 32.3 bits (70), Expect = 5.3
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 24 REYPS--KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
R+Y S K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 32 RKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.3 bits (70), Expect = 5.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 277 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKNKW 423
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 31.9 bits (69), Expect = 7.0
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 RITTKVPPTSRTGMLSSLVSTGTPGKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRY 297
R T P +S+T M S L TG +V G N+IH+R K + + + Y ++
Sbjct: 74 RGTRHSPGSSQTDM-SKLSVTGRHLEVLTTRGIDNRIHRRFKSQFLMSNIGYGSNKKIKH 132
Query: 298 TVDFSFEKFSAKDLKD 345
T+ S +KF ++K+
Sbjct: 133 TLPSSLQKFLVHNIKE 148
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 7.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 217 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 366
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-like
protein; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Proliferating-cell nucleolar
antigen-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 812
Score = 31.9 bits (69), Expect = 7.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 92 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPAKCTRG 211
V G+ G + ++RR+L QA+ + +R R PPA RG
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARG 63
>UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 662
Score = 31.9 bits (69), Expect = 7.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 92 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPAKCTRG 211
V G+ G + ++RR+L QA+ + +R R PPA RG
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARG 63
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 7.0
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 122
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 7.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 60 PGKVVLVLSGRYAGRKAIVVKNYDEG 137
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q09DH2 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 1456
Score = 31.5 bits (68), Expect = 9.2
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 213 HPLVHFAGGTCRYQRRKHARTACXXXXXXXXXXX*PCDPRTGHLRPALLYPASL 52
HPLV G R R++H R PR LR ALL ASL
Sbjct: 507 HPLVVHVGALYREWRQEHTRGLARTSSGLEAILAADTAPRLARLRQALLRIASL 560
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 9.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 152
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,998,835
Number of Sequences: 1657284
Number of extensions: 8756885
Number of successful extensions: 27315
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 26596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27290
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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