Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K21
(461 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein L27|Schizosac... 93 2e-20
SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein L27|Schizosacch... 87 2e-18
SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces p... 31 0.065
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 30 0.20
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 28 0.80
SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyce... 27 1.1
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 27 1.8
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 26 2.4
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 3.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 4.3
SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp... 25 5.6
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 5.6
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 7.4
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 25 7.4
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 25 7.4
SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit S... 24 9.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 24 9.8
SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase S... 24 9.8
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 24 9.8
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 24 9.8
>SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 92.7 bits (220), Expect = 2e-20
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K MG +I +RS++KPF+KVVNYNHLMPTRY ++ K +A K+P +R
Sbjct: 50 PLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSA 109
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
R + FE +Y+SGK+ WFF LRF
Sbjct: 110 ARKTVKKTFEEKYQSGKSAWFFTPLRF 136
Score = 68.9 bits (161), Expect = 3e-13
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 215
M KI+KPGKV L+ GR+AG+K ++++ D+G+ P+GHA VAG++RYP + + G
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMG 58
>SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 3|||Manual
Length = 136
Score = 86.6 bits (205), Expect = 2e-18
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K MG +I KRS++KPF+KV+NYNHLMPTRY ++ K + +P++R
Sbjct: 50 PLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSA 109
Query: 364 LRFNTRVRFEXRYKSGKNKWFFXKLRF 444
+ + FE +Y++GK+ WFF LRF
Sbjct: 110 AKKTVKNTFEEKYQTGKSAWFFTPLRF 136
Score = 72.5 bits (170), Expect = 3e-14
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 215
M KI+KPGKV LV GR+AG+K ++++N D+G+ P+GHA VAG++RYP + + G
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMG 58
>SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 195
Score = 31.5 bits (68), Expect = 0.065
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 134
P+K+ + PG V ++L+GR+ G++ +V+ ++
Sbjct: 45 PTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED 78
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 29.9 bits (64), Expect = 0.20
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -3
Query: 330 CAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHFAGGTCRY 175
CA+F E N + WH YNL R Y + D + P G C Y
Sbjct: 772 CAKFSLKETNKTSFWHS---SYNLFNRQYHVDMPDNVSDLPQTRLCYGACVY 820
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 27.9 bits (59), Expect = 0.80
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 214 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDF-SFEKFSAKDLKDP 348
G + I R K P K+VNYNH + + +F K D+ DP
Sbjct: 28 GNHWIFARFKFYPLNKIVNYNHFHSSSCQSEAKNFYKQFEGDISDP 73
>SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYD 131
+ ++ G+VVLV G Y G+ A++V D
Sbjct: 6 RYVEVGRVVLVTKGEYTGKLAVIVDIVD 33
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 148 LSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGYSLY 20
L E+P + F T+ AY P S T+ G + G +Y
Sbjct: 689 LEEIPYNKFFKTVEKNEAYNPSSKSATIDGLQRYTSMIGNQIY 731
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 274 YSLQPSRKALSWTSCGFYSFPSSCALC 194
YS+ PS +L W + + S PS LC
Sbjct: 16 YSILPSYSSLQWITNAWCSLPSIYILC 42
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 3.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 345 VFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLY 244
V+QVFC F A+ I +Q++ V NL E Y
Sbjct: 315 VYQVFCTNFPNAQQLIIDNQNQLLKVANLLEPSY 348
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 4.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 77 QHYFTRLHYLTHLGGIFPLLVD 12
Q YFT ++ G +FP +VD
Sbjct: 803 QQYFTAIYKFEGCGSVFPFVVD 824
>SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 5.6
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +1
Query: 193 GKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD---FSFEKFSAKDLKDPAKRKK 363
G V + +G +IHK PF N N +TV F+ E + L D K K
Sbjct: 286 GLVTQPLGLFRIHKLPLALPFTNHANSNEAGDLSFTVSKRRFTIEPWVLPPLDDEQKDTK 345
Query: 364 L 366
+
Sbjct: 346 I 346
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 196 KVHKRMGKNKIHKRSKIKPFVKVV 267
K+ KR+G I SK+ P VK+V
Sbjct: 205 KIAKRIGFTDISLSSKLTPMVKIV 228
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 301 VDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKN 417
+ F K L DP+ R+K F ++ + +Y+ KN
Sbjct: 150 LQFQIPSNEKKSLDDPSPRRKPSFFSKSNLKRKYRYLKN 188
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 24.6 bits (51), Expect = 7.4
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 244 IKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTR 381
+ PF K Y H + T + S KF + K K R +TR
Sbjct: 39 VSPFFKKERYKHHLETNVSSHQSATKFIEPEPSPTKKTKLTRRDTR 84
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 301 LYNVLASSDYSLQPSRKALSWTSCGFY 221
LY L+ S + P R W SC FY
Sbjct: 246 LYRGLSVSMLKVAPGRYECLWLSCHFY 272
>SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit
S28|Schizosaccharomyces pombe|chr 2|||Manual
Length = 288
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 145 TSRTGMLSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYN 276
TSR LS + KRM + +H+R ++ +++ VN++
Sbjct: 223 TSRILALSDHCKNHKKDQTGKRMLRYYVHQRQRMLKYLRKVNFD 266
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 318 FKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSH 211
F V I C H V + + ++ GP ++F++ H
Sbjct: 90 FDNRVGVIECIHLVNFMCHDSLKINFGPRINFVIGH 125
>SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase
Srb10 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 175 VSTGTPGKVHKRMGKNKIHKR 237
+S+GT GKV+K + N KR
Sbjct: 11 ISSGTYGKVYKAVSSNSNDKR 31
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 327 AEFFKAEVNCITCWHQVIIVYNLHE 253
A FF + +C++ + ++ YN+HE
Sbjct: 69 APFFTKQNSCLSRFRELAQTYNIHE 93
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 30 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYD 131
Y ++ G + GK+V+++SG A K+ + + D
Sbjct: 40 YSTESGMLFHAGKLVIIMSGLPARGKSNIAVSID 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,847,750
Number of Sequences: 5004
Number of extensions: 37366
Number of successful extensions: 136
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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