Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K20
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17J49 Cluster: Putative uncharacterized protein; n=1; ...    38   0.16 
UniRef50_Q6FU87 Cluster: Similar to tr|Q03956 Saccharomyces cere...    36   0.64 
UniRef50_Q30SB6 Cluster: Two component transcriptional regulator...    34   2.6  
UniRef50_UPI0001555901 Cluster: PREDICTED: similar to Chromosome...    33   7.8  
UniRef50_A2ED55 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q17J49 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 117

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 213 ERKNDDIHQQLKELLQSNIAIXQEMREEN 299
           E++NDD+ +QL  LLQSN  I Q M+EEN
Sbjct: 64  EQRNDDLKEQLLNLLQSNREIRQSMQEEN 92


>UniRef50_Q6FU87 Cluster: Similar to tr|Q03956 Saccharomyces
           cerevisiae YDR202c RAV2; n=1; Candida glabrata|Rep:
           Similar to tr|Q03956 Saccharomyces cerevisiae YDR202c
           RAV2 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 343

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +2

Query: 80  VVKMKMDLIKTXNLXKMITTEDITEEYELLXSTLDELNSALDFLR 214
           ++K+K  LIK  NL +MI  EDI E Y +L S L+ELN  +D L+
Sbjct: 126 IMKLKDILIKLQNL-QMI--EDIEEFYNVLESALEELNDCIDTLQ 167


>UniRef50_Q30SB6 Cluster: Two component transcriptional regulator,
           winged helix family; n=1; Thiomicrospira denitrificans
           ATCC 33889|Rep: Two component transcriptional regulator,
           winged helix family - Thiomicrospira denitrificans
           (strain ATCC 33889 / DSM 1351)
          Length = 269

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +2

Query: 104 IKTXNLXKMITTEDITEEYELLXSTLDELN 193
           I T N+ K+ + +DIT++Y+LL  TLD +N
Sbjct: 208 ILTDNIGKIYSNDDITKQYDLLNETLDIIN 237


>UniRef50_UPI0001555901 Cluster: PREDICTED: similar to Chromosome 9
           open reading frame 16, partial; n=2; Mammalia|Rep:
           PREDICTED: similar to Chromosome 9 open reading frame
           16, partial - Ornithorhynchus anatinus
          Length = 61

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 213 ERKNDDIHQQLKELLQSNIAIXQEMREE 296
           E KND +H QLKELL+SN     E +++
Sbjct: 19  EEKNDHLHAQLKELLESNRQTHLEFQQQ 46


>UniRef50_A2ED55 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 685

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +2

Query: 68  IQKMVVKMKMDLIKTXNLXKMITTEDITEEYELLXSTLDELNSALDFL 211
           I K+    +  ++   +  K++T ED+ + Y+L  S + ++ S + FL
Sbjct: 105 ISKLFAHFREQILDKLDFLKIVTVEDLIDHYDLFNSQISKIQSFMKFL 152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,248,262
Number of Sequences: 1657284
Number of extensions: 7412298
Number of successful extensions: 18933
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18918
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)