Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K20
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.41 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 199 IGFLASVKMMIFTNN*KSFCNPILQLXKKCV 291
           +G L     +I TNN   +C  ++ L K CV
Sbjct: 229 LGDLYVTLYIILTNNQAKYCTTLIGLIKNCV 259


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 505 LRYLSMNNYLSCLHHLNV 558
           LR    NNY S  H+L V
Sbjct: 511 LRVQRFNNYQSLAHYLRV 528


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 567 HIYVNXNEQ*HLVEHCSXKKNGS 635
           H+ V+  E+ +  EHCS K + S
Sbjct: 209 HLRVHTGERPYGCEHCSMKFSDS 231


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 259 NPILQLXKKCVKKIRKSTTVIEEMQIQHYFKFN 357
           NP+    +  V+K RK  +  + ++++  F FN
Sbjct: 233 NPLEWTGQVTVRKKRKPYSKFQTLELEKEFLFN 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,163
Number of Sequences: 336
Number of extensions: 2458
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)