Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K20
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879...    28   7.4  
03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805     28   7.4  

>08_02_1014 -
           23586552-23587224,23587402-23587463,23587735-23587950,
           23588125-23588209,23589232-23589389,23589505-23589625,
           23590081-23590243,23590330-23590415,23590660-23590742,
           23590816-23591677,23593266-23593693
          Length = 978

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 646 LCFIDPFFXCEQCSTKCYCSF 584
           +CF    F C+QC    YCSF
Sbjct: 125 VCFRPTTFRCKQCKAVKYCSF 145


>03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805
          Length = 517

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 338 STILNLIVQIYMLPSVICLSQKCK-IQIVNLNI 433
           S  L +  Q+Y + SV+CL  +CK ++ + LNI
Sbjct: 355 SLSLQVFAQVYDIASVLCLLTRCKFLKHLELNI 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,576,406
Number of Sequences: 37544
Number of extensions: 174577
Number of successful extensions: 305
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)