Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K20
         (650 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.20 
SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  

>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 16/46 (34%), Positives = 30/46 (65%)
 Frame = +3

Query: 207  SCERKNDDIHQQLKELLQSNIAIXQEMREENKEVNNSN*RNANTAL 344
            SC++++D+I +++KE L+S  ++ QE +EE + +   N  N  T L
Sbjct: 2666 SCQKQSDEI-RRIKEDLKSKESLLQETKEELEALKEENSENKETIL 2710


>SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 161

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -1

Query: 410 FYTFETNKLH*VTCIFAQLNLK*CCICISSITVVDFLIFFTHFLXNCNIGLQKLFQLLVN 231
           ++    NK H V  +  QLN     I + ++T+   L F T  + +C   +  L   L++
Sbjct: 74  YFVARENKYHSVQPLSCQLNQCKLLIAVRTVTLYGLLPFCTSTIVDCRENINSLLATLLD 133

Query: 230 I 228
           I
Sbjct: 134 I 134


>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1149

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 213 ERKNDDIHQQLKELLQSNIAIXQEMREENKEVNN 314
           ER   D  QQL +L Q   ++   +REE +  +N
Sbjct: 505 ERMRQDYEQQLSDLKQEVFSLTARLREEEQNADN 538


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,917
Number of Sequences: 59808
Number of extensions: 235603
Number of successful extensions: 524
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)