Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K19
         (583 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whol...    34   2.1  
UniRef50_Q54EB4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q552X7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14696, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1835

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 419 VNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEE--KTSQRTTLSVQQQXENAT 568
           VN PNP +   G PK S     + N+D N+ E  +  Q  T +  Q   NA+
Sbjct: 416 VNSPNPALMQAGNPKISSAAAYKSNNDQNNTEAPRWDQGATSNPNQPQNNAS 467


>UniRef50_Q54EB4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 357

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +2

Query: 422 NKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATAT 574
           NK N N  +  GPK  + D  +  ++ N+E++T+++ T    ++  + T T
Sbjct: 292 NKNNNNNNNNNGPKIEEYDNQKQEEEENEEKETNKQQTQKDDEKETSTTTT 342


>UniRef50_Q552X7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 667

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENA 565
           P K  NK +P + S    K  K  +   +D S+DE   S+     V++  EN+
Sbjct: 76  PRKNKNKKSPTMNSFNSNKLFKKSLTSSSDSSSDEYSESEEEEEQVEEDEENS 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,299,752
Number of Sequences: 1657284
Number of extensions: 6384775
Number of successful extensions: 17892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17851
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)