Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K19
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.8  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 86  LNLTQPLLNYPTNYXDTVPNTLKL 157
           L+ T+P+L YP NY ++   +L L
Sbjct: 29  LSDTRPMLPYPQNYINSYLFSLSL 52


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 125 YXDTVPNTLKLHATFYFTLLLCPSLMTYVRYYSNI 229
           + + +   ++L+  FY+T  LC  +  +   Y NI
Sbjct: 142 FREYLAEAVQLYFQFYYTYFLCVIVCIFRGKYRNI 176


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 155 LHATFYFTLLLCPSLMTYVRYYSNIVVSTH 244
           L  T+YF       L  Y  YY+ I+ + H
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVH 126


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 391 ATSSSTNEKGEQTKSKHTVYRRSEE 465
           +TSSST+   +QT       R SE+
Sbjct: 387 STSSSTHTSSQQTSDSFLSKRNSEK 411


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 145 HAETTRYFLLYAIIVSLINDLCTI 216
           +A+   YFL+YA++  L+    T+
Sbjct: 152 YAQFIVYFLIYAVLEMLLQKYKTV 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,530
Number of Sequences: 336
Number of extensions: 1892
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)