Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K19
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.34 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.34 
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   2.4  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 398 VVLPTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTS 523
           VV+   R  K NPN+QST   +K +      +   + EE+ S
Sbjct: 33  VVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEES 74


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 398 VVLPTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTS 523
           VV+   R  K NPN+QST   +K +      +   + EE+ S
Sbjct: 33  VVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEES 74


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 292 LPLRRLTF*TSCLFNLVCAYY 230
           L L RL+F   C+  ++CA+Y
Sbjct: 384 LVLNRLSFVVYCVIFIICAFY 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,721
Number of Sequences: 2352
Number of extensions: 7531
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)