Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K19
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050525-1|AAH50525.1|  785|Homo sapiens ubiquitin specific pept...    29   9.1  
AL117503-1|CAB55967.1|  217|Homo sapiens hypothetical protein pr...    29   9.1  
AF117386-1|AAD11441.1|  785|Homo sapiens ubiquitin-specific prot...    29   9.1  
AB208893-1|BAD92130.1|  586|Homo sapiens ubiquitin specific prot...    29   9.1  
AB018326-1|BAA34503.2|  899|Homo sapiens KIAA0783 protein protein.     29   9.1  
AB014458-1|BAA34703.1|  785|Homo sapiens ubiquitin specific prot...    29   9.1  

>BC050525-1|AAH50525.1|  785|Homo sapiens ubiquitin specific
           peptidase 1 protein.
          Length = 785

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATATYE 580
           P+K +NK N       G +KSK D   +N  SN ++  S     +   +  + T T+E
Sbjct: 654 PSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHE 711


>AL117503-1|CAB55967.1|  217|Homo sapiens hypothetical protein
           protein.
          Length = 217

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATATYE 580
           P+K +NK N       G +KSK D   +N  SN ++  S     +   +  + T T+E
Sbjct: 86  PSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHE 143


>AF117386-1|AAD11441.1|  785|Homo sapiens ubiquitin-specific
           protease protein.
          Length = 785

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATATYE 580
           P+K +NK N       G +KSK D   +N  SN ++  S     +   +  + T T+E
Sbjct: 654 PSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHE 711


>AB208893-1|BAD92130.1|  586|Homo sapiens ubiquitin specific
           protease 1 variant protein.
          Length = 586

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATATYE 580
           P+K +NK N       G +KSK D   +N  SN ++  S     +   +  + T T+E
Sbjct: 455 PSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHE 512


>AB018326-1|BAA34503.2|  899|Homo sapiens KIAA0783 protein protein.
          Length = 899

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 446 STGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENA 565
           S GG KK K  V+  N  ++DEE T+   TLS  +  E++
Sbjct: 275 SEGGCKKKKSKVLSRNS-ADDEELTNDSLTLSQSKSNEDS 313


>AB014458-1|BAA34703.1|  785|Homo sapiens ubiquitin specific
           protease protein.
          Length = 785

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 407 PTKRVNKPNPNIQSTGGPKKSKIDVIEHNDDSNDEEKTSQRTTLSVQQQXENATATYE 580
           P+K +NK N       G +KSK D   +N  SN ++  S     +   +  + T T+E
Sbjct: 654 PSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHE 711


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,168,524
Number of Sequences: 237096
Number of extensions: 970084
Number of successful extensions: 1722
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)